RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-208	ENST00000462996	LGI3	Q8N145	548 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996	SLC35E1	Q96K37	410 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996	TRGV9	Q99603	122 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996	IGKV1OR2-108	A0A075B7D4	117 aa		13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	GABARAP	H6UMI1	98 aa		13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	GABARAP	O95166	117 aa		13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	FABP1	P07148	127 aa		13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	ZNF182	P17025	639 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	LSM3	P62310	102 aa	Known RBP	13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	TMEM263	Q8WUH6	116 aa	Known RBP	13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	NAA60	Q9H7X0	242 aa		13.77	□□□□□ -0.21
PTPN18-208	ENST00000462996	SULT1A3	P0DMM9	295 aa		13.76	□□□□□ -0.21
PTPN18-208	ENST00000462996	SULT1A4	P0DMN0	295 aa		13.76	□□□□□ -0.21
PTPN18-208	ENST00000462996	SCGB2B2	Q4G0G5	96 aa		13.76	□□□□□ -0.21
PTPN18-208	ENST00000462996	DTD1	Q8TEA8	209 aa		13.76	□□□□□ -0.21
PTPN18-208	ENST00000462996	RBKS	Q9H477	322 aa		13.76	□□□□□ -0.21
PTPN18-208	ENST00000462996		A0A087WTM6	91 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996		A0A096LPF7	62 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	GAGE12B	A1L429	117 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	GAGE7	O76087	117 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	GAGE12F	P0CL80	117 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	GAGE12G	P0CL81	117 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	GAGE12I	P0CL82	117 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	RHOB	P62745	196 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	ZNF738	Q8NE65	137 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	OR4D5	Q8NGN0	318 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	OR1B1	Q8NGR6	318 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	OR52I2	Q8NH67	350 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	HSPB7	Q9UBY9	170 aa		13.75	□□□□□ -0.21
PTPN18-208	ENST00000462996	SIVA1	O15304	175 aa		13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	PRB4	P10163	310 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	TBP	P20226	339 aa		13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	HIST1H1A	Q02539	215 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	CACFD1	Q9UGQ2	172 aa		13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	TMEM56-RWDD3	S4R434	201 aa		13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	DNAH8	Q96JB1	4490 aa		13.74	□□□□□ -0.21
PTPN18-208	ENST00000462996	HPGDS	O60760	199 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	ADAP1	O75689	374 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	TNFAIP8	O95379	198 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	GCSH	P23434	173 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	FGL1	Q08830	312 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	THAP8	Q8NA92	274 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	OR8A1	Q8NGG7	326 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	VSIG2	Q96IQ7	327 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	PPP1R14D	Q9NXH3	145 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	PRR13	Q9NZ81	148 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	MTFP1	Q9UDX5	166 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	SLC45A2	Q9UMX9	530 aa		13.73	□□□□□ -0.21
PTPN18-208	ENST00000462996	KIR3DS1	Q14943	382 aa		13.72	□□□□□ -0.21
PTPN18-208	ENST00000462996	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN18-208	ENST00000462996	GPR82	Q96P67	336 aa		13.72	□□□□□ -0.21
PTPN18-208	ENST00000462996	C14orf166	Q9Y224	244 aa	Known RBP	13.72	□□□□□ -0.21
PTPN18-208	ENST00000462996	CRYM-AS1	A6NIL9	109 aa		13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996		H7BYZ3	331 aa		13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996	ORM2	P19652	201 aa		13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996	GATA2	P23769	480 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996	ATP5I	P56385	69 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996	GGNBP1	Q5YKI7	109 aa		13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996	TMPRSS5	Q9H3S3	457 aa		13.71	□□□□□ -0.21
PTPN18-208	ENST00000462996	RAB3D	O95716	219 aa		13.7	□□□□□ -0.22
PTPN18-208	ENST00000462996	CFD	P00746	253 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPN18-208	ENST00000462996	RLN2	P04090	185 aa		13.7	□□□□□ -0.22
PTPN18-208	ENST00000462996	CDKN1B	P46527	198 aa		13.7	□□□□□ -0.22
PTPN18-208	ENST00000462996	TMEM229B	Q8NBD8	167 aa		13.7	□□□□□ -0.22
PTPN18-208	ENST00000462996	YIPF6	Q96EC8	236 aa		13.7	□□□□□ -0.22
PTPN18-208	ENST00000462996	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	NXPH4	O95158	308 aa		13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	CXCL3	P19876	107 aa		13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	CCR6	P51684	374 aa		13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	SMCO1	Q147U7	214 aa		13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	GPR107	Q5VW38	600 aa		13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	FAAP20	Q6NZ36	180 aa		13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	LRP1	Q07954	4544 aa	Known RBP	13.69	□□□□□ -0.22
PTPN18-208	ENST00000462996	PSG3	Q16557	428 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	STEAP1B	Q6NZ63	245 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	TMED4	Q7Z7H5	227 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	NFE4	Q86UQ8	179 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	IL22RA2	Q969J5	263 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	TMEM147	Q9BVK8	224 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	GPR132	Q9UNW8	380 aa		13.68	□□□□□ -0.22
PTPN18-208	ENST00000462996	TAS2R19	P59542	299 aa		13.67	□□□□□ -0.22
PTPN18-208	ENST00000462996		Q6ZTI0	123 aa		13.67	□□□□□ -0.22
PTPN18-208	ENST00000462996	LYZL2	Q7Z4W2	148 aa		13.67	□□□□□ -0.22
PTPN18-208	ENST00000462996	CCDC28A	Q8IWP9	274 aa		13.67	□□□□□ -0.22
PTPN18-208	ENST00000462996	FAM25A	B3EWG3	89 aa		13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	FAM25C	B3EWG5	89 aa		13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	FAM25G	B3EWG6	89 aa		13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996		H3BRN7	92 aa		13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	SURF2	Q15527	256 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	BPIFC	Q8NFQ6	507 aa		13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	C20orf144	Q9BQM9	153 aa		13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN18-208	ENST00000462996	SNURFL	B1AK76	121 aa		13.65	□□□□□ -0.22
PTPN18-208	ENST00000462996	RPUSD4	Q96CM3	377 aa	Known RBP	13.65	□□□□□ -0.22
PTPN18-208	ENST00000462996		A0A0B4J2A0	478 aa		13.64	□□□□□ -0.23
PTPN18-208	ENST00000462996	PRSS46	E5RG02	174 aa		13.64	□□□□□ -0.23
PTPN18-208	ENST00000462996	IAPP	P10997	89 aa		13.64	□□□□□ -0.23
PTPN18-208	ENST00000462996	NCS1	P62166	190 aa		13.64	□□□□□ -0.23
PTPN18-208	ENST00000462996	RAB11A	P62491	216 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms