RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ZNF728P0DKX0 622 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 MORN2Q502X0 79 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 THEM6Q8WUY1 208 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 RASL12Q9NYN1 266 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 IGLV3-9A0A075B6K5 115 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 DPRXA6NFQ7 191 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 ZNF705DP0CH99 300 aaPredicted RBP1.63□□□□□ -2.15
SMC4-203ENST00000462668 MIAQ16674 131 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 SLC25A40Q8TBP6 338 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 PSORS1C2Q9UIG4 136 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 FUT9Q9Y231 359 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 RBM7Q9Y580 266 aaKnown RBP1.63□□□□□ -2.15
SMC4-203ENST00000462668 PLXNA4Q9HCM2 1894 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 GRIFINA4D1Z8 144 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 IFNA7P01567 189 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 IL4P05112 153 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 LINC01554Q52M75 96 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 RPS4Y2Q8TD47 263 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 SLAMF6Q96DU3 332 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 CCDC115Q96NT0 180 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 IBTKQ9P2D0 1353 aaPredicted RBP1.63□□□□□ -2.15
SMC4-203ENST00000462668 LAMA4Q16363 1823 aa1.63□□□□□ -2.15
SMC4-203ENST00000462668 HELZ2Q9BYK8 2649 aaKnown RBP1.62□□□□□ -2.15
SMC4-203ENST00000462668 LEPROTO15243 131 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 NPYP01303 97 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 HTR4Q13639 388 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 SURF2Q15527 256 aaPredicted RBP1.62□□□□□ -2.15
SMC4-203ENST00000462668 KISS1Q15726 138 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 SKA2Q8WVK7 121 aaPredicted RBP1.62□□□□□ -2.15
SMC4-203ENST00000462668 ASB4Q9Y574 426 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 MED23Q9ULK4 1368 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 DNAH6Q9C0G6 4158 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 DOCK8Q8NF50 2099 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 TRAV9-1A0A075B6T8 112 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 TRAV40A0A0B4J280 105 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 TMEM212A6NML5 194 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 SLC25A16P16260 332 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 LPAR6P43657 344 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 ZNF675Q8TD23 568 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 TEX37Q96LM6 180 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 ZNF285Q96NJ3 590 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 GPX7Q96SL4 187 aaPredicted RBP1.62□□□□□ -2.15
SMC4-203ENST00000462668 HUWE1Q7Z6Z7 4374 aaKnown RBP1.62□□□□□ -2.15
SMC4-203ENST00000462668 IGHV3-73A0A0B4J1V6 119 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 TSTD3H0UI37 97 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 NDUFC2O95298 119 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 CRYZL1O95825 349 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 DEFA6Q01524 100 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 C2orf91Q6ZV80 131 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 RNF182Q8N6D2 247 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 VCXQ9H320 206 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 HSPB11Q9Y547 144 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 PIEZO1Q92508 2521 aa1.62□□□□□ -2.15
SMC4-203ENST00000462668 DSPP15924 2871 aaKnown RBP1.62□□□□□ -2.15
SMC4-203ENST00000462668 ANK1P16157 1881 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 J3QRK9 145 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 PPP1CCP36873 323 aaKnown RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 TAS2R30P59541 319 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 KRTAP10-6P60371 365 aaPredicted RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 CLVS1Q8IUQ0 354 aaPredicted RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 ZNF439Q8NDP4 499 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 MND1Q9BWT6 205 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 A0A0B4J2C4 111 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 MAP1LC3B2A6NCE7 125 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 GGTLC3B5MD39 225 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 TRAPPC2LH3BP13 241 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 GZMBP10144 247 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 RPL7P18124 248 aaKnown RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 INSL3P51460 131 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 RPL18Q07020 188 aaKnown RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 DYDC1Q8WWB3 177 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 SEC22CQ9BRL7 303 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 TMEM70Q9BUB7 260 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 MAP1LC3BQ9GZQ8 125 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 KLK12Q9UKR0 248 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 SNX12Q9UMY4 172 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 PTPRDP23468 1912 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 IGLV3-16A0A075B6K0 115 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 A6NED7 52 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 EFCAB10A6NFE3 127 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 IGKV1-16P04430 117 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 HRES1P13985 223 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 CCR2P41597 374 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 FXYD7P58549 80 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 SCGB2B2Q4G0G5 96 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 ANGPTL5Q86XS5 388 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 OR52R1Q8NGF1 315 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 SSR3Q9UNL2 185 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 PDCD11Q14690 1871 aaKnown RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 IGLV4-60A0A075B6I1 120 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 EVX1P49640 407 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 RPL30P62888 115 aaKnown RBP1.61□□□□□ -2.15
SMC4-203ENST00000462668 HMGN2P46Q86SG4 172 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 OR5J2Q8NH18 312 aa1.61□□□□□ -2.15
SMC4-203ENST00000462668 C7orf66A4D0T2 115 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 H3BPC8 53 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 ZNF22P17026 224 aaPredicted RBP1.6□□□□□ -2.15
SMC4-203ENST00000462668 KRTAP5-9P26371 169 aa1.6□□□□□ -2.15
SMC4-203ENST00000462668 GTF2A1P52655 376 aaPredicted RBP1.6□□□□□ -2.15
SMC4-203ENST00000462668 RWDD2BP57060 319 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms