RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ATOH7Q8N100 152 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 TIMD4Q96H15 378 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 ZNF492Q9P255 531 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 NBASA2RRP1 2371 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
ACTB-207ENST00000462494 FBXL19-AS1Q494R0 122 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 ASCL2Q99929 193 aa13.4□□□□□ -0.26
ACTB-207ENST00000462494 LCN12Q6JVE5 192 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 IL4P05112 153 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 G0S2P27469 103 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 FBLN7Q53RD9 439 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 CT83Q5H943 113 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 BPIFA4PQ86YQ2 179 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 OR4F17Q8NGA8 305 aa13.39□□□□□ -0.27
ACTB-207ENST00000462494 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
ACTB-207ENST00000462494 LOC105371242A0A075B767 164 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 M0QZK8 103 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 IGLV2-11P01706 119 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 CEACAM3P40198 252 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 RBPMS2Q6ZRY4 209 aaKnown RBP13.38□□□□□ -0.27
ACTB-207ENST00000462494 KIR3DL3Q8N743 410 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 OR11H6Q8NGC7 330 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 CFHR4Q92496 578 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 SHANK2-AS3Q9BTD1 123 aa13.38□□□□□ -0.27
ACTB-207ENST00000462494 FAM181BA6NEQ2 426 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 M0QZ24 198 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 FCGR2BP31994 310 aaPredicted RBP13.37□□□□□ -0.27
ACTB-207ENST00000462494 RNF125Q96EQ8 232 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 TRBV19A0A075B6N1 114 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 CTRLP40313 264 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 ZNF491Q8N8L2 437 aa13.37□□□□□ -0.27
ACTB-207ENST00000462494 H3BRN7 92 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 PMCHL1Q16048 86 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 GFRA4Q9GZZ7 299 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 SVEP1Q4LDE5 3571 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 NCBP2LA6PVI3 153 aaKnown RBP13.36□□□□□ -0.27
ACTB-207ENST00000462494 CHEK1O14757 476 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 GNG7O60262 68 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 HLA-DRB1P01911 266 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
ACTB-207ENST00000462494 MAJINQ3KP22 176 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 Q56UQ5 140 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 EBLN2Q6P2I7 272 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 RAXQ9Y2V3 346 aa13.36□□□□□ -0.27
ACTB-207ENST00000462494 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
ACTB-207ENST00000462494 C5orf64Q2M2E5 130 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 BCL6BQ8N143 479 aaPredicted RBP13.35□□□□□ -0.27
ACTB-207ENST00000462494 NPBQ8NG41 125 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 SH2D7A6NKC9 451 aaPredicted RBP13.35□□□□□ -0.27
ACTB-207ENST00000462494 NDUFA3O95167 84 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 IGLC2P0DOY2 106 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 ZC2HC1AQ96GY0 325 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 URB1-AS1Q96HZ7 61 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 CLEC5AQ9NY25 188 aa13.35□□□□□ -0.27
ACTB-207ENST00000462494 IGF2RP11717 2491 aa13.34□□□□□ -0.27
ACTB-207ENST00000462494 NPIPB6E9PJ23 425 aa13.34□□□□□ -0.27
ACTB-207ENST00000462494 BTF3P20290 206 aaKnown RBP13.34□□□□□ -0.27
ACTB-207ENST00000462494 SIGLEC15Q6ZMC9 328 aa13.34□□□□□ -0.27
ACTB-207ENST00000462494 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
ACTB-207ENST00000462494 TXN2Q99757 166 aa13.34□□□□□ -0.27
ACTB-207ENST00000462494 RNF24Q9Y225 148 aa13.34□□□□□ -0.27
ACTB-207ENST00000462494 HRNRQ86YZ3 2850 aaPredicted RBP13.34□□□□□ -0.27
ACTB-207ENST00000462494 M0R1W7 72 aa13.33□□□□□ -0.27
ACTB-207ENST00000462494 IGHV3-23P01764 117 aa13.33□□□□□ -0.27
ACTB-207ENST00000462494 ZNF25P17030 456 aaPredicted RBP13.33□□□□□ -0.27
ACTB-207ENST00000462494 PRTN3P24158 256 aa13.33□□□□□ -0.27
ACTB-207ENST00000462494 UQCR10Q9UDW1 63 aa13.33□□□□□ -0.27
ACTB-207ENST00000462494 ODF3BA8MYP8 253 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 K7EQM0 130 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 M0R3E3 92 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 IGLC3P0DOY3 106 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 HOXB4P17483 251 aaPredicted RBP13.33□□□□□ -0.28
ACTB-207ENST00000462494 KLRB1Q12918 225 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 Q6ZN92 141 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 TMEM75Q8N9X5 138 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 PSG8Q9UQ74 426 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 MSRB2Q9Y3D2 182 aa13.33□□□□□ -0.28
ACTB-207ENST00000462494 FAM231BA6NCW3 169 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 ARPC1AQ92747 370 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 ATRXP46100 2492 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 ZNF785A8K8V0 405 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 MFAP4P55083 255 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 VMO1Q7Z5L0 202 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 DYNAPQ8N1N2 210 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 TPPP3Q9BW30 176 aa13.32□□□□□ -0.28
ACTB-207ENST00000462494 LOC102724200A0A096LPH7 203 aaPredicted RBP13.31□□□□□ -0.28
ACTB-207ENST00000462494 C2orf70A6NJV1 201 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 NDPQ00604 133 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 PSG3Q16557 428 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 C11orf71Q6IPW1 123 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 KLHDC1Q8N7A1 406 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 ZFP30Q9Y2G7 519 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 IGLV11-55A0A075B6I3 123 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 TRAV30A0A087WSZ9 112 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 HAX1O00165 279 aa13.31□□□□□ -0.28
ACTB-207ENST00000462494 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms