RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 RNF126Q9BV68 326 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
CSMD3-205ENST00000462254 F8P00451 2351 aa3.56□□□□□ -1.84
CSMD3-205ENST00000462254 SETXQ7Z333 2677 aaKnown RBP3.56□□□□□ -1.84
CSMD3-205ENST00000462254 FN1P02751 2386 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 CUBNO60494 3623 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 IGHV3OR16-12A0A075B7B8 117 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 FXYD6-FXYD2A0A087WZ82 144 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 IGHV7-81A0A0B4J1V7 117 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 IGHV3-38A0A0C4DH36 116 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 A0A1B0GWB2 263 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 NCBP2LA6PVI3 153 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 PRAC2D3DTV9 90 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 H3BP45 60 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 FGF16O43320 207 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 BUB3O43684 328 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 SYNGR2O43760 224 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 SSSCA1O60232 199 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 MPDU1O75352 247 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 SNAPC5O75971 98 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 IFNA17P01571 189 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 HLA-DRB1P01911 266 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 SLC25A4P12235 298 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 SRP14P37108 136 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 VDAC2P45880 294 aaPredicted RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 RPL27AP46776 148 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 EIF2B2P49770 351 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 NKX2-5P52952 324 aaPredicted RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 HSPE1P61604 102 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 PRCDQ00LT1 54 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 PLGLAQ15195 96 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 PRSS8Q16651 343 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 PRSS54Q6PEW0 395 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 BOD1L2Q8IYS8 172 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 TEX29Q8N6K0 151 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 STPG4Q8N801 248 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF738Q8NE65 137 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 OR5T1Q8NG75 326 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 OR10W1Q8NGF6 305 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 OR5B3Q8NH48 314 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF502Q8TBZ5 544 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 SRSF12Q8WXF0 261 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 FAM103A1Q9BTL3 118 aaKnown RBP3.55□□□□□ -1.84
CSMD3-205ENST00000462254 NDUFA4L2Q9NRX3 87 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 TNFRSF19Q9NS68 423 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 VPREB3Q9UKI3 123 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 PRNDQ9UKY0 176 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF257Q9Y2Q1 563 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 MOB4Q9Y3A3 225 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 OR51B2Q9Y5P1 312 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 HIVEP2P31629 2446 aa3.55□□□□□ -1.84
CSMD3-205ENST00000462254 FLNBO75369 2602 aaKnown RBP3.54□□□□□ -1.84
CSMD3-205ENST00000462254 IGLC7A0M8Q6 106 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 IGSF23A1L1A6 192 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 FAM24AA6NFZ4 105 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 PMS2P5A8MQ11 134 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 LYRM9A8MSI8 78 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 HMSDA8MTL9 139 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 CEBPZOSA8MTT3 80 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 ARPC5O15511 151 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 REG1AP05451 166 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 PET100P0DJ07 73 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 APELAP0DMC3 54 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 RNASE2P10153 161 aaKnown RBP3.54□□□□□ -1.84
CSMD3-205ENST00000462254 CXCL2P19875 107 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 MAS1LP35410 378 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 HILS1P60008 231 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 SPCS3P61009 180 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 GNB1P62873 340 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 SLC35B1P78383 322 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 WT1-ASQ06250 92 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 TMEM267Q0VDI3 215 aaPredicted RBP3.54□□□□□ -1.84
CSMD3-205ENST00000462254 FXYD3Q14802 87 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 LGALSLQ3ZCW2 172 aaPredicted RBP3.54□□□□□ -1.84
CSMD3-205ENST00000462254 ZFP69Q49AA0 526 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 LAMTOR1Q6IAA8 161 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 OR1L8Q8NGR8 309 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 DCUN1D4Q92564 292 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 ARPC1AQ92747 370 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 OR4C12Q96R67 309 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 RASL11BQ9BPW5 248 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 COMMD5Q9GZQ3 224 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 LYRM2Q9NU23 88 aaPredicted RBP3.54□□□□□ -1.84
CSMD3-205ENST00000462254 FKBP11Q9NYL4 201 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 PSENENQ9NZ42 101 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 TNFSF18Q9UNG2 199 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 NOTCH2Q04721 2471 aa3.54□□□□□ -1.84
CSMD3-205ENST00000462254 NSD1Q96L73 2696 aaPredicted RBP3.54□□□□□ -1.84
CSMD3-205ENST00000462254 PSMB11A5LHX3 300 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF705EA8MWA4 302 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-205ENST00000462254 E9PLD3 99 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 INS-IGF2F8WCM5 200 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 K7EQG2 157 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 M0QXV9 152 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 CRLF1O75462 422 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 MED6O75586 246 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 OXTP01178 125 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 IGHG2P01859 326 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 RLN2P04090 185 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms