RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	BUB3	O43684	328 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	SYNJ2BP	P57105	145 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	ZNF726P1	Q15940	193 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	NSUN5P1	Q3KNT7	163 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	RAX2	Q96IS3	184 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	UHRF2	Q96PU4	802 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	SMDT1	Q9H4I9	107 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	MANBAL	Q9NQG1	85 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	SMPX	Q9UHP9	88 aa		11.84	□□□□□ -0.51
C1S-209	ENST00000461983	PF4	P02776	101 aa		11.83	□□□□□ -0.52
C1S-209	ENST00000461983	HIST1H1E	P10412	219 aa	Known RBP	11.83	□□□□□ -0.52
C1S-209	ENST00000461983	GCHFR	P30047	84 aa		11.83	□□□□□ -0.52
C1S-209	ENST00000461983	UNQ9165/PRO28630	Q6UXU0	137 aa		11.83	□□□□□ -0.52
C1S-209	ENST00000461983	LURAP1L	Q8IV03	231 aa		11.83	□□□□□ -0.52
C1S-209	ENST00000461983	OR9G4	Q8NGQ1	327 aa		11.83	□□□□□ -0.52
C1S-209	ENST00000461983	CLEC5A	Q9NY25	188 aa		11.83	□□□□□ -0.52
C1S-209	ENST00000461983	ARL14EPL	P0DKL9	152 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	ATF4	P18848	351 aa	Predicted RBP	11.82	□□□□□ -0.52
C1S-209	ENST00000461983	UBE2L3	P68036	154 aa	Known RBP	11.82	□□□□□ -0.52
C1S-209	ENST00000461983	PDE6H	Q13956	83 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	DEFB136	Q30KP8	78 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	C16orf54	Q6UWD8	224 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	IQCF2	Q8IXL9	164 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	SCRT1	Q9BWW7	348 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	SLC25A2	Q9BXI2	301 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	SIGLEC8	Q9NYZ4	499 aa		11.82	□□□□□ -0.52
C1S-209	ENST00000461983	RAB19	A4D1S5	217 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	ADARB2-AS1	A8MUL3	147 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	OVOL1	O14753	267 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	NDUFS6	O75380	124 aa	Known RBP	11.81	□□□□□ -0.52
C1S-209	ENST00000461983	CBLN1	P23435	193 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	SLURP1	P55000	103 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	TM4SF20	Q53R12	229 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	SPATA31B1P	Q5VZV4	182 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	C18orf65	Q6ZTR6	163 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	LYPD1	Q8N2G4	141 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	FAM167A-AS1	Q96KT0	104 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	TCEAL7	Q9BRU2	100 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	RHPN1-AS1	Q9BWJ2	59 aa		11.81	□□□□□ -0.52
C1S-209	ENST00000461983	TRAV5	A0A0B4J249	113 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983		A0A1W2PRE2	83 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	LINC00862	A6NCI5	91 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	C2orf70	A6NJV1	201 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	ZNF785	A8K8V0	405 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	CHEK1	O14757	476 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	ZNF253	O75346	499 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	NBEAP1	P0C6P0	100 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	KRTAP10-3	P60369	221 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	PAFAH1B2	P68402	229 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	PSG9	Q00887	426 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	PEA15	Q15121	130 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	DLX4	Q92988	240 aa	Predicted RBP	11.8	□□□□□ -0.52
C1S-209	ENST00000461983	ZNF414	Q96IQ9	312 aa		11.8	□□□□□ -0.52
C1S-209	ENST00000461983	IGHV3OR16-8	A0A075B7F1	116 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983		A0A087X0K7	114 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	TMEM213	A2RRL7	107 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	HMGB3	O15347	200 aa	Known RBP	11.79	□□□□□ -0.52
C1S-209	ENST00000461983	ZNF207	O43670	478 aa	Known RBP	11.79	□□□□□ -0.52
C1S-209	ENST00000461983	FOLR2	P14207	255 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	GP9	P14770	177 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	FGF8	P55075	233 aa	Predicted RBP	11.79	□□□□□ -0.52
C1S-209	ENST00000461983	UQCC3	Q6UW78	93 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	SIGLEC15	Q6ZMC9	328 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	GNG13	Q9P2W3	67 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	VAX2	Q9UIW0	290 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	CUBN	O60494	3623 aa		11.79	□□□□□ -0.52
C1S-209	ENST00000461983	RIPPLY3	P57055	190 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	MORN5	Q5VZ52	161 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	LEMD1	Q68G75	181 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	SSX7	Q7RTT5	188 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	DYNLRB2	Q8TF09	96 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	GLMP	Q8WWB7	406 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	FXYD5	Q96DB9	178 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	FAM210A	Q96ND0	272 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	SLC50A1	Q9BRV3	221 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	MCRIP2	Q9BUT9	160 aa	Known RBP	11.78	□□□□□ -0.52
C1S-209	ENST00000461983	EIF5A2	Q9GZV4	153 aa	Known RBP	11.78	□□□□□ -0.52
C1S-209	ENST00000461983	AAMDC	Q9H7C9	122 aa		11.78	□□□□□ -0.52
C1S-209	ENST00000461983	TRAV25	A0A0B4J276	109 aa		11.77	□□□□□ -0.53
C1S-209	ENST00000461983	RBFOX3	A6NFN3	312 aa		11.77	□□□□□ -0.53
C1S-209	ENST00000461983	IGLC2	P0DOY2	106 aa		11.77	□□□□□ -0.53
C1S-209	ENST00000461983	INSL3	P51460	131 aa		11.77	□□□□□ -0.53
C1S-209	ENST00000461983	RPL11	P62913	178 aa	Known RBP	11.77	□□□□□ -0.53
C1S-209	ENST00000461983	ARL6IP6	Q8N6S5	226 aa		11.77	□□□□□ -0.53
C1S-209	ENST00000461983	OR2K2	Q8NGT1	345 aa		11.77	□□□□□ -0.53
C1S-209	ENST00000461983	TRBV19	A0A075B6N1	114 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983		A0A1B0GV50	99 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983		F6UZH7	168 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	PDE6D	O43924	150 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	OR10J4	P0C629	311 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	BCL2	P10415	239 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	ID1	P41134	155 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.76	□□□□□ -0.53
C1S-209	ENST00000461983	EIF4E3	Q8N5X7	224 aa	Known RBP	11.76	□□□□□ -0.53
C1S-209	ENST00000461983	PCNP	Q8WW12	178 aa	Known RBP	11.76	□□□□□ -0.53
C1S-209	ENST00000461983	DUX3	Q96PT4	197 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	GPR61	Q9BZJ8	451 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	NRN1	Q9NPD7	142 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	PRELID1	Q9Y255	219 aa		11.76	□□□□□ -0.53
C1S-209	ENST00000461983	TRAV2	A0A0B4J234	112 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms