RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 CITED4Q96RK1 184 aa11.82□□□□□ -0.52
SF3A3-203ENST00000461869 RAB19A4D1S5 217 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 IFNA1P01562 189 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 IL4P05112 153 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 GP9P14770 177 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 ORM2P19652 201 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 ARL3P36405 182 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 PPT1P50897 306 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 KHDC3LQ587J8 217 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 PBDC1Q9BVG4 233 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 TECRQ9NZ01 308 aaKnown RBP11.81□□□□□ -0.52
SF3A3-203ENST00000461869 DOK5Q9P104 306 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 HIGD1AQ9Y241 93 aa11.81□□□□□ -0.52
SF3A3-203ENST00000461869 BMPR1BO00238 502 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 CXorf1O96002 111 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 STAG3L2P0CL84 134 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 STAG3L3P0CL85 134 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 ADMP35318 185 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
SF3A3-203ENST00000461869 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 STXBP6Q8NFX7 210 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 TMEM37Q8WXS4 190 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
SF3A3-203ENST00000461869 CHRDL1Q9BU40 450 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 SEPSECSQ9HD40 501 aaKnown RBP11.8□□□□□ -0.52
SF3A3-203ENST00000461869 SACSQ9NZJ4 4579 aa11.8□□□□□ -0.52
SF3A3-203ENST00000461869 DNAH7Q8WXX0 4024 aa11.79□□□□□ -0.52
SF3A3-203ENST00000461869 C8orf88P0DMB2 117 aa11.79□□□□□ -0.52
SF3A3-203ENST00000461869 PSMB3P49720 205 aa11.79□□□□□ -0.52
SF3A3-203ENST00000461869 UQCC3Q6UW78 93 aa11.79□□□□□ -0.52
SF3A3-203ENST00000461869 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
SF3A3-203ENST00000461869 LINC00305Q7Z4B0 112 aa11.79□□□□□ -0.52
SF3A3-203ENST00000461869 EIF4E3Q8N5X7 224 aaKnown RBP11.79□□□□□ -0.52
SF3A3-203ENST00000461869 PEF1Q9UBV8 284 aaKnown RBP11.79□□□□□ -0.52
SF3A3-203ENST00000461869 PUS1Q9Y606 427 aaKnown RBP eCLIP11.79□□□□□ -0.52
SF3A3-203ENST00000461869 A0A1B0GV50 99 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 GGCTO75223 188 aaKnown RBP11.78□□□□□ -0.52
SF3A3-203ENST00000461869 IGHV3-11P01762 117 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 LGALS1P09382 135 aaKnown RBP11.78□□□□□ -0.52
SF3A3-203ENST00000461869 SLURP1P55000 103 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 PMS2P11Q13670 270 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 MIR17HGQ75NE6 70 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 FAM210AQ96ND0 272 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 MANBALQ9NQG1 85 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 RABAC1Q9UI14 185 aa11.78□□□□□ -0.52
SF3A3-203ENST00000461869 STAB2Q8WWQ8 2551 aa11.77□□□□□ -0.52
SF3A3-203ENST00000461869 LINC01619G3V211 115 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 NDUFA4O00483 81 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 HMGB3O15347 200 aaKnown RBP11.77□□□□□ -0.53
SF3A3-203ENST00000461869 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
SF3A3-203ENST00000461869 PATE2Q6UY27 113 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 IQCF2Q8IXL9 164 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 TMEM167BQ9NRX6 74 aa11.77□□□□□ -0.53
SF3A3-203ENST00000461869 MRPL27Q9P0M9 148 aaKnown RBP11.77□□□□□ -0.53
SF3A3-203ENST00000461869 PPP5D1E7EU14 171 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 H3BRN7 92 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 OR7C2O60412 319 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 USF2Q15853 346 aaPredicted RBP11.76□□□□□ -0.53
SF3A3-203ENST00000461869 SPATA31B1PQ5VZV4 182 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 TOMM20LQ6UXN7 152 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 UHRF2Q96PU4 802 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 SHANK2-AS3Q9BTD1 123 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 SLC25A39Q9BZJ4 359 aaPredicted RBP11.76□□□□□ -0.53
SF3A3-203ENST00000461869 SMDT1Q9H4I9 107 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 GNG13Q9P2W3 67 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
SF3A3-203ENST00000461869 ANKRD34BA5PLL1 514 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 IGHV4-30-4P0DP06 118 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 GCHFRP30047 84 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 PEA15Q15121 130 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 GUK1Q16774 197 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 NARS2Q96I59 477 aaKnown RBP11.75□□□□□ -0.53
SF3A3-203ENST00000461869 METTL26Q96S19 204 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 EIF5A2Q9GZV4 153 aaKnown RBP11.75□□□□□ -0.53
SF3A3-203ENST00000461869 SORL1Q92673 2214 aa11.75□□□□□ -0.53
SF3A3-203ENST00000461869 IGHV4OR15-8A0A075B7B6 117 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 A0A087WW49 117 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 RBFOX3A6NFN3 312 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 ATP6V1G1O75348 118 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 BCL2P10415 239 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 UBE2L3P68036 154 aaKnown RBP11.74□□□□□ -0.53
SF3A3-203ENST00000461869 FAM106AQ4KMX7 169 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 TOR2AQ5JU69 321 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 SLC25A2Q9BXI2 301 aa11.74□□□□□ -0.53
SF3A3-203ENST00000461869 NDUFS6O75380 124 aaKnown RBP11.73□□□□□ -0.53
SF3A3-203ENST00000461869 ZP3P21754 424 aa11.73□□□□□ -0.53
SF3A3-203ENST00000461869 CCL20P78556 96 aa11.73□□□□□ -0.53
SF3A3-203ENST00000461869 ZNF506Q5JVG8 444 aa11.73□□□□□ -0.53
SF3A3-203ENST00000461869 BPIFA4PQ86YQ2 179 aa11.73□□□□□ -0.53
SF3A3-203ENST00000461869 Q8N1Y9 231 aa11.73□□□□□ -0.53
SF3A3-203ENST00000461869 TMEM190Q8WZ59 177 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms