RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 GGNBP1Q5YKI7 109 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF767PQ75MW2 155 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 TOMM5Q8N4H5 51 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 POM121L12Q8N7R1 296 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 THAP8Q8NA92 274 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 OR4B1Q8NGF8 309 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 FAM210BQ96KR6 192 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 RPRMQ9NS64 109 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 PAIP2BQ9ULR5 123 aaKnown RBP6.23□□□□□ -1.41
HDAC9-220ENST00000461409 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 GOLT1BQ9Y3E0 138 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 TMED3Q9Y3Q3 217 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
HDAC9-220ENST00000461409 IGHV3OR16-12A0A075B7B8 117 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 IAPPP10997 89 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 PAX9P55771 341 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 GDF5OSQ5U4N7 250 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 ZNF709Q8N972 641 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 BPIFCQ8NFQ6 507 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 OR4D5Q8NGN0 318 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 TRIM63Q969Q1 353 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 GPR82Q96P67 336 aa6.22□□□□□ -1.41
HDAC9-220ENST00000461409 C7orf50Q9BRJ6 194 aaKnown RBP6.22□□□□□ -1.41
HDAC9-220ENST00000461409 IGKV1OR2-108A0A075B7D4 117 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 A0A0J9YX75 114 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 SYNGR2O43760 224 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 HBE1P02100 147 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 S100A5P33763 92 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 FXYD7P58549 80 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 DEFB1P60022 68 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 UBE2MP61081 183 aaKnown RBP6.21□□□□□ -1.42
HDAC9-220ENST00000461409 AKR1C1Q04828 323 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 FAM78BQ5VT40 261 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 C16orf92Q96LL3 132 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 NIPSNAP3BQ9BS92 247 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 TMEM147Q9BVK8 224 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 MAGT1Q9H0U3 335 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 SLC25A22Q9H936 323 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 DOK5Q9P104 306 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 DKK2Q9UBU2 259 aa6.21□□□□□ -1.42
HDAC9-220ENST00000461409 ZNF98A6NK75 572 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 WRBO00258 174 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 SFT2D2O95562 160 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 IFNA21P01568 189 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 ORM2P19652 201 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 PPP1R1AQ13522 171 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 OXA1LQ15070 435 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 RRN3P1Q2M238 152 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 SPANXN5Q5MJ07 72 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 FAM222AQ5U5X8 452 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 S100A7AQ86SG5 101 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 UBE2DNLQ8IWF7 75 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 OR1B1Q8NGR6 318 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 TMEM208Q9BTX3 173 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 RSG1Q9BU20 258 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 SLC25A32Q9H2D1 315 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 STRAPQ9Y3F4 350 aaKnown RBP6.2□□□□□ -1.42
HDAC9-220ENST00000461409 HERC2O95714 4834 aa6.2□□□□□ -1.42
HDAC9-220ENST00000461409 LOC102723971A0A1B0GUV8 181 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 A8MTW9 85 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 PRSS46E5RG02 174 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 F6UB75 175 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 DUSP14O95147 198 aaKnown RBP6.19□□□□□ -1.42
HDAC9-220ENST00000461409 HOXB5P09067 269 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 HTN3P15516 51 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 LGALS9BQ3B8N2 356 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 SPANXN2Q5MJ10 180 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 ACOT7LQ6ZUV0 252 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 IGF2BP2-AS1Q96M15 143 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 YTHDF2Q9Y5A9 579 aaKnown RBP6.19□□□□□ -1.42
HDAC9-220ENST00000461409 V9GYH0 126 aa6.19□□□□□ -1.42
HDAC9-220ENST00000461409 SMCO3A2RU48 225 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 CCDC160A6NGH7 325 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 H3BP45 60 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 HYPMO75409 117 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 INSP01308 110 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 IL5P05113 134 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
HDAC9-220ENST00000461409 INPP1P49441 399 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 RAP2BP61225 183 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 B2MP61769 119 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 DAD1P61803 113 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 SELENOTP62341 195 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 RNF212Q495C1 297 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 SOHLH1Q5JUK2 328 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 TMEM144Q7Z5S9 345 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 C1orf158Q8N1D5 194 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 SCRT1Q9BWW7 348 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 RNF24Q9Y225 148 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
HDAC9-220ENST00000461409 NAP1L6A6NFF2 107 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 PRSS29PA6NIE9 313 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 M0R2N4 97 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 GATA2P23769 480 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-220ENST00000461409 CNN1P51911 297 aaKnown RBP6.17□□□□□ -1.42
HDAC9-220ENST00000461409 AMTNQ6UX39 209 aa6.17□□□□□ -1.42
HDAC9-220ENST00000461409 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms