RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DLG5Q8TDM6 1919 aa1.11□□□□□ -2.23
VCL-203ENST00000461383 TRBV6-7A0A0A0MS04 114 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 TCRBV4S1A1TA0A5B7 111 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 PPP5D1E7EU14 171 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 C17orf112F2Z3M2 114 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 PFDN1O60925 122 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 TRGC2P03986 189 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 CRHP06850 196 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 ARL14EPLP0DKL9 152 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 CRYBA4P53673 196 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 TMBIM6P55061 237 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 FAM74A1Q5RGS3 127 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 C2orf82Q6UX34 121 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 C4orf22Q6V702 233 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 Q8IYB0 196 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 OR5D14Q8NGL3 314 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 MYLKQ15746 1914 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 CASP8AP2Q9UKL3 1982 aa1.1□□□□□ -2.23
VCL-203ENST00000461383 MYO18AQ92614 2054 aaKnown RBP1.09□□□□□ -2.23
VCL-203ENST00000461383 LAMB2P55268 1798 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 KIAA1549Q9HCM3 1950 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 TLCD2A6NGC4 264 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 ZNF736B4DX44 427 aaPredicted RBP1.09□□□□□ -2.23
VCL-203ENST00000461383 M0R233 179 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 IFNA4P05014 189 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 FABP1P07148 127 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 CXCL1P09341 107 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 OR10J4P0C629 311 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 GLRXP35754 106 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 INSL3P51460 131 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 PLCXD2Q0VAA5 305 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 DCUN1D2Q6PH85 259 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 Q8N814 137 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 NUP35Q8NFH5 326 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 OR5D16Q8NGK9 328 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 TP53RKQ96S44 253 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 GPX7Q96SL4 187 aaPredicted RBP1.09□□□□□ -2.23
VCL-203ENST00000461383 RETNLBQ9BQ08 111 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 MAP1LC3BQ9GZQ8 125 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 PCBD2Q9H0N5 130 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 CDC42SE1Q9NRR8 79 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 LAMTOR3Q9UHA4 124 aa1.09□□□□□ -2.23
VCL-203ENST00000461383 PLXNA4Q9HCM2 1894 aa1.09□□□□□ -2.24
VCL-203ENST00000461383 COL6A6A6NMZ7 2263 aa1.09□□□□□ -2.24
VCL-203ENST00000461383 PTPRFP10586 1907 aa1.09□□□□□ -2.24
VCL-203ENST00000461383 SYNMO15061 1565 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 ZFC3H1O60293 1989 aaKnown RBP1.08□□□□□ -2.24
VCL-203ENST00000461383 YTHDC2Q9H6S0 1430 aaKnown RBP1.08□□□□□ -2.24
VCL-203ENST00000461383 CEP164Q9UPV0 1460 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 ODAMA1E959 279 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 CD2P06729 351 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 ARPP19P56211 112 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 CNBPP62633 177 aaKnown RBP1.08□□□□□ -2.24
VCL-203ENST00000461383 CDK6Q00534 326 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 ZNF431Q8TF32 576 aaPredicted RBP1.08□□□□□ -2.24
VCL-203ENST00000461383 BORCS5Q969J3 196 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 CHCHD1Q96BP2 118 aaKnown RBP1.08□□□□□ -2.24
VCL-203ENST00000461383 PLEKHB2Q96CS7 222 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 CACYBPQ9HB71 228 aaKnown RBP1.08□□□□□ -2.24
VCL-203ENST00000461383 ATPIF1Q9UII2 106 aa1.08□□□□□ -2.24
VCL-203ENST00000461383 CAMSAP2Q08AD1 1489 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 ARHGEF11O15085 1522 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 TRAV10A0A0B4J240 114 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 A0A1B0GV72 72 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 MAP1LC3B2A6NCE7 125 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 OR2T8A6NH00 312 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 GPR31O00270 319 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 RER1O15258 196 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 PIAS1O75925 651 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 CST7O76096 145 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 CSN2P05814 226 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 RAB5CP51148 216 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 MSMO1Q15800 293 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 RTL8BQ17RB0 113 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 FKBP1CQ5VVH2 108 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 C1orf140Q5VVS0 124 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 POP5Q969H6 163 aaKnown RBP1.07□□□□□ -2.24
VCL-203ENST00000461383 ODF3Q96PU9 254 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 RTL8AQ9BWD3 113 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 TAS2R7Q9NYW3 318 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 ZFP30Q9Y2G7 519 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 NUP210Q8TEM1 1887 aaPredicted RBP1.07□□□□□ -2.24
VCL-203ENST00000461383 UNC13CQ8NB66 2214 aa1.07□□□□□ -2.24
VCL-203ENST00000461383 KDM6AO15550 1401 aaPredicted RBP1.06□□□□□ -2.24
VCL-203ENST00000461383 CACNA1BQ00975 2339 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 LOC110117498A0A087WWA1 95 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 H3BQV1 296 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 K7ERJ3 54 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 HIST1H2BKO60814 126 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 ERC2-IT1O76042 136 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 DNAL4O96015 105 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 HIST1H2BJP06899 126 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 DSCR4P56555 118 aaPredicted RBP1.06□□□□□ -2.24
VCL-203ENST00000461383 ROMO1P60602 79 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 KLRD1Q13241 179 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 LTC4SQ16873 150 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 MPV17LQ2QL34 196 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 FAM19A2Q8N3H0 131 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.06□□□□□ -2.24
VCL-203ENST00000461383 RAB37Q96AX2 223 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms