RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 OR10G8Q8NGN5 311 aa8.45□□□□□ -1.06
IFT88-204ENST00000461115 CCDC140Q96MF4 163 aa8.45□□□□□ -1.06
IFT88-204ENST00000461115 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
IFT88-204ENST00000461115 CHRDL1Q9BU40 450 aa8.45□□□□□ -1.06
IFT88-204ENST00000461115 URGCP-MRPS24S4R325 110 aa8.45□□□□□ -1.06
IFT88-204ENST00000461115 S100A7P31151 101 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 RPS10P46783 165 aaKnown RBP8.44□□□□□ -1.06
IFT88-204ENST00000461115 CNN1P51911 297 aaKnown RBP8.44□□□□□ -1.06
IFT88-204ENST00000461115 CFHR3Q02985 330 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 Q56UQ5 140 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 TMEM219Q86XT9 240 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 EEF1AKMT3Q96AZ1 226 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 ATG101Q9BSB4 218 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 MLST8Q9BVC4 326 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 Q9H3A6 140 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 V9GYV3 84 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 ABCA12Q86UK0 2595 aa8.44□□□□□ -1.06
IFT88-204ENST00000461115 PGPA6NDG6 321 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 J3QKU1 62 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 ZNF253O75346 499 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 TCRAP04437 139 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 RAB9AP51151 201 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 FAM3BP58499 235 aaPredicted RBP8.43□□□□□ -1.06
IFT88-204ENST00000461115 RANP62826 216 aaKnown RBP8.43□□□□□ -1.06
IFT88-204ENST00000461115 Q5PR19 223 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 KCNIP4Q6PIL6 250 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 SIGLEC15Q6ZMC9 328 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 IL36BQ9NZH7 164 aa8.43□□□□□ -1.06
IFT88-204ENST00000461115 SOX21Q9Y651 276 aaPredicted RBP8.43□□□□□ -1.06
IFT88-204ENST00000461115 OR2T8A6NH00 312 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 UBE2CO00762 179 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 TGFAP01135 160 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 IER3P46695 156 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 LEMD1Q68G75 181 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 OR4F17Q8NGA8 305 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 OR5R1Q8NH85 324 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 FMC1Q96HJ9 113 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 USMG5Q96IX5 58 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 U3KQE9 123 aa8.42□□□□□ -1.06
IFT88-204ENST00000461115 APCP25054 2843 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 A0A087X0K7 114 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 TMEM89A2RUT3 159 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 CLPSL1A2RUU4 121 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 SH2D7A6NKC9 451 aaPredicted RBP8.41□□□□□ -1.06
IFT88-204ENST00000461115 AP4M1O00189 453 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 BMPR1BO00238 502 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 LTAP01374 205 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 SLC25A5P05141 298 aaKnown RBP8.41□□□□□ -1.06
IFT88-204ENST00000461115 CLEC3BP05452 202 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 RPL7P18124 248 aaKnown RBP8.41□□□□□ -1.06
IFT88-204ENST00000461115 ATP5G2Q06055 141 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 DEFB112Q30KQ8 113 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 TOMM20LQ6UXN7 152 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 BCL6BQ8N143 479 aaPredicted RBP8.41□□□□□ -1.06
IFT88-204ENST00000461115 GPR82Q96P67 336 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 AURKAIP1Q9NWT8 199 aaPredicted RBP8.41□□□□□ -1.06
IFT88-204ENST00000461115 RABAC1Q9UI14 185 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 S4R3C0 116 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 CELSR2Q9HCU4 2923 aa8.41□□□□□ -1.06
IFT88-204ENST00000461115 SERTM2A0A1B0GWG4 89 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 ZNF320A2RRD8 509 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 BUB3O43684 328 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BKO60814 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BJP06899 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BOP23527 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BBP33778 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BDP58876 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 RPL15P61313 204 aaKnown RBP8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BCP62807 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST2H2BEQ16778 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.4□□□□□ -1.06
IFT88-204ENST00000461115 C1orf194Q5T5A4 169 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 XP32Q5T750 250 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 Q6YL49 198 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 BAGE2Q86Y30 109 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 ZFP82Q8N141 532 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 Q8N3U1 123 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 BLNKQ8WV28 456 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BHQ93079 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 LINC00479Q96M42 142 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 C17orf77Q96MU5 243 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BNQ99877 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 HIST1H2BMQ99879 126 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 ZNF492Q9P255 531 aa8.4□□□□□ -1.06
IFT88-204ENST00000461115 CENPEQ02224 2701 aa8.4□□□□□ -1.07
IFT88-204ENST00000461115 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 PPP5D1E7EU14 171 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 TRGC2P03986 189 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 GPR183P32249 361 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 BLCAPP62952 87 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 GNG5P63218 68 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 PSG9Q00887 426 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 RELQ04864 619 aaPredicted RBP8.39□□□□□ -1.07
IFT88-204ENST00000461115 OR5I1Q13606 314 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 LY6EQ16553 131 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 COA6Q5JTJ3 125 aaKnown RBP8.39□□□□□ -1.07
IFT88-204ENST00000461115 ACTL10Q5JWF8 245 aa8.39□□□□□ -1.07
IFT88-204ENST00000461115 FAM209BQ5JX69 171 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms