RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
HDLBP-229ENST00000460826 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 A8MZ25 164 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 ARPC5O15511 151 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 C10orf113Q5VZT2 155 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 LINC00305Q7Z4B0 112 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 APRG1Q8IVJ8 170 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 PARD6GQ9BYG4 376 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-229ENST00000460826 DNAJC4Q9NNZ3 241 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 NRN1Q9NPD7 142 aa10.4□□□□□ -0.74
HDLBP-229ENST00000460826 ELOA3CA0A087WX78 387 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-229ENST00000460826 TRAV5A0A0B4J249 113 aa10.39□□□□□ -0.75
HDLBP-229ENST00000460826 MRPS12O15235 138 aaKnown RBP10.39□□□□□ -0.75
HDLBP-229ENST00000460826 ZNF688P0C7X2 276 aa10.39□□□□□ -0.75
HDLBP-229ENST00000460826 ZNF709Q8N972 641 aa10.39□□□□□ -0.75
HDLBP-229ENST00000460826 OR1L4Q8NGR5 311 aa10.39□□□□□ -0.75
HDLBP-229ENST00000460826 SCGB1C1Q8TD33 95 aa10.39□□□□□ -0.75
HDLBP-229ENST00000460826 B9D2Q9BPU9 175 aa10.39□□□□□ -0.75
HDLBP-229ENST00000460826 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
HDLBP-229ENST00000460826 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
HDLBP-229ENST00000460826 C17orf112F2Z3M2 114 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 SOCS3O14543 225 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
HDLBP-229ENST00000460826 S100A7P31151 101 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 GALR1P47211 349 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 DEFB131AP59861 70 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 RPL7L1Q6DKI1 246 aaKnown RBP10.38□□□□□ -0.75
HDLBP-229ENST00000460826 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 LINC00322Q6ZN03 302 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-229ENST00000460826 HSD17B11Q8NBQ5 300 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 PFDN5Q99471 154 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 ASCL2Q99929 193 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 FAM110AQ9BQ89 295 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 MFFQ9GZY8 342 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 TUBA4BQ9H853 241 aa10.38□□□□□ -0.75
HDLBP-229ENST00000460826 RPL7P18124 248 aaKnown RBP10.37□□□□□ -0.75
HDLBP-229ENST00000460826 CD300CQ08708 224 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 TCTE3Q8IZS6 198 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 GPR82Q96P67 336 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
HDLBP-229ENST00000460826 HMSDA8MTL9 139 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 SNRPCP09234 159 aaKnown RBP10.36□□□□□ -0.75
HDLBP-229ENST00000460826 CXCL2P19875 107 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 ATP6V0CP27449 155 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 ZNF266Q14584 549 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 PSMG4Q5JS54 123 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 MIR17HGQ75NE6 70 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 S100A7AQ86SG5 101 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 SEPSECSQ9HD40 501 aaKnown RBP10.36□□□□□ -0.75
HDLBP-229ENST00000460826 CYTL1Q9NRR1 136 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 TIMM9Q9Y5J7 89 aa10.36□□□□□ -0.75
HDLBP-229ENST00000460826 A0A087X0K7 114 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 ATF4P18848 351 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-229ENST00000460826 CMC4P56277 68 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-229ENST00000460826 DEFB1P60022 68 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 FAM78BQ5VT40 261 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 KCNRGQ8N5I3 272 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 SH3BGRL3Q9H299 93 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 STAB2Q8WWQ8 2551 aa10.35□□□□□ -0.75
HDLBP-229ENST00000460826 TRAV8-2A0A0B4J237 113 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 H3BTX0 84 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 EIF3GO75821 320 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDLBP-229ENST00000460826 MEOX2P50222 304 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 RAB2AP61019 212 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 ZNF345Q14585 488 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 HAGHQ16775 308 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 IGFL4Q6B9Z1 124 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 AKAP14Q86UN6 197 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 BPIFA4PQ86YQ2 179 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 FAM167A-AS1Q96KT0 104 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 SLC25A2Q9BXI2 301 aa10.34□□□□□ -0.75
HDLBP-229ENST00000460826 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 H3BQ15 152 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 ISLRO14498 428 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 PYYP10082 97 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
HDLBP-229ENST00000460826 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 PSMB3P49720 205 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
HDLBP-229ENST00000460826 OR2G3Q8NGZ4 309 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 LINC00052Q96N35 136 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-229ENST00000460826 RNF24Q9Y225 148 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 FUT9Q9Y231 359 aa10.33□□□□□ -0.76
HDLBP-229ENST00000460826 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-229ENST00000460826 SLC17A3O00476 420 aa10.32□□□□□ -0.76
HDLBP-229ENST00000460826 TAAR5O14804 337 aa10.32□□□□□ -0.76
HDLBP-229ENST00000460826 C1QBP02746 253 aa10.32□□□□□ -0.76
HDLBP-229ENST00000460826 ID1P41134 155 aa10.32□□□□□ -0.76
HDLBP-229ENST00000460826 RNF182Q8N6D2 247 aa10.32□□□□□ -0.76
HDLBP-229ENST00000460826 ARPC5LQ9BPX5 153 aa10.32□□□□□ -0.76
HDLBP-229ENST00000460826 MRPL32Q9BYC8 188 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms