RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 DEFB114Q30KQ6 69 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 SIGLEC15Q6ZMC9 328 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 TCF24Q7RTU0 167 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 RNF141Q8WVD5 230 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 TMED6Q8WW62 240 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 TMEM37Q8WXS4 190 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 SPAG8Q99932 426 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-206ENST00000460235 WNK1Q9H4A3 2382 aa9.37□□□□□ -0.91
HDAC4-206ENST00000460235 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 TSPAN4O14817 238 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 WIPF1O43516 503 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 IGLV1-51P01701 117 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 FAM122CQ6P4D5 195 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 PATE2Q6UY27 113 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 IL34Q6ZMJ4 242 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 SH3BGRL3Q9H299 93 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 SEPSECSQ9HD40 501 aaKnown RBP9.36□□□□□ -0.91
HDAC4-206ENST00000460235 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
HDAC4-206ENST00000460235 IGHV3-49A0A0A0MS15 119 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 OR7C2O60412 319 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 CXorf1O96002 111 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 HBE1P02100 147 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 PPT1P50897 306 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
HDAC4-206ENST00000460235 BLOC1S1P78537 153 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 GLMPQ8WWB7 406 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 UHRF2Q96PU4 802 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 SCRT1Q9BWW7 348 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 TMEM167BQ9NRX6 74 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
HDAC4-206ENST00000460235 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 HIST1H1EP10412 219 aaKnown RBP9.34□□□□□ -0.91
HDAC4-206ENST00000460235 IGLL1P15814 213 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 SULT1A2P50226 295 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 PDE6HQ13956 83 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 GUCA2BQ16661 112 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
HDAC4-206ENST00000460235 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 GTSCR1Q86UQ5 136 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 RPP25LQ8N5L8 163 aaKnown RBP9.34□□□□□ -0.91
HDAC4-206ENST00000460235 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 ZNF414Q96IQ9 312 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 PAXXQ9BUH6 204 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 HRH4Q9H3N8 390 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 MLXQ9UH92 298 aa9.34□□□□□ -0.91
HDAC4-206ENST00000460235 ZNF253O75346 499 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
HDAC4-206ENST00000460235 H2AFB1P0C5Y9 115 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 PSG9Q00887 426 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 GCSAMLQ5JQS6 135 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 FAM74A1Q5RGS3 127 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 FAM213BQ8TBF2 198 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 SAT2Q96F10 170 aaPredicted RBP9.33□□□□□ -0.92
HDAC4-206ENST00000460235 AAMDCQ9H7C9 122 aa9.33□□□□□ -0.92
HDAC4-206ENST00000460235 A0A087X0K7 114 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 ZNF705EA8MWA4 302 aaPredicted RBP9.32□□□□□ -0.92
HDAC4-206ENST00000460235 ISLRO14498 428 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 STAG3L2P0CL84 134 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 STAG3L3P0CL85 134 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 PSMB3P49720 205 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 RAB14P61106 215 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
HDAC4-206ENST00000460235 FAM90A2PQ658T7 463 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 TEX261Q6UWH6 196 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 TMEM61Q8N0U2 210 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
HDAC4-206ENST00000460235 UBQLN2Q9UHD9 624 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
HDAC4-206ENST00000460235 TENM1Q9UKZ4 2725 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 MAP1LC3B2A6NCE7 125 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 TAGLN2P37802 199 aaKnown RBP9.31□□□□□ -0.92
HDAC4-206ENST00000460235 LEMD1Q68G75 181 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 ALKAL2Q6UX46 152 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 ADAMTSL5Q6ZMM2 481 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 IQCF2Q8IXL9 164 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 SFT2D1Q8WV19 159 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 MBD3L1Q8WWY6 194 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 C16orf92Q96LL3 132 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 FAM110AQ9BQ89 295 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 MAP1LC3BQ9GZQ8 125 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
HDAC4-206ENST00000460235 ZNF256Q9Y2P7 627 aaPredicted RBP9.31□□□□□ -0.92
HDAC4-206ENST00000460235 TRAV1-1A0A0B4J248 108 aa9.3□□□□□ -0.92
HDAC4-206ENST00000460235 IFNA1P01562 189 aa9.3□□□□□ -0.92
HDAC4-206ENST00000460235 GP9P14770 177 aa9.3□□□□□ -0.92
HDAC4-206ENST00000460235 ZNF767PQ75MW2 155 aa9.3□□□□□ -0.92
HDAC4-206ENST00000460235 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
HDAC4-206ENST00000460235 IGKV3-7A0A075B6H7 116 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
HDAC4-206ENST00000460235 ARL14EPLP0DKL9 152 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms