RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 KCNIP2Q9NS61 270 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 RFNGQ9Y644 331 aa9.53□□□□□ -0.88
COL18A1-206ENST00000459895 A0A1B0GVG6 124 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 IFNA5P01569 189 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 INO80EQ8NBZ0 244 aaPredicted RBP9.52□□□□□ -0.89
COL18A1-206ENST00000459895 OR11H4Q8NGC9 324 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 ST6GAL2Q96JF0 529 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 PFDN5Q99471 154 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 FAM110AQ9BQ89 295 aa9.52□□□□□ -0.89
COL18A1-206ENST00000459895 RBMY1BA6NDE4 496 aaKnown RBP9.51□□□□□ -0.89
COL18A1-206ENST00000459895 RBMY1EA6NEQ0 496 aaKnown RBP9.51□□□□□ -0.89
COL18A1-206ENST00000459895 MRPS12O15235 138 aaKnown RBP9.51□□□□□ -0.89
COL18A1-206ENST00000459895 RBMY1DP0C7P1 496 aaKnown RBP9.51□□□□□ -0.89
COL18A1-206ENST00000459895 GALR1P47211 349 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 DEFB131AP59861 70 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 ZNF266Q14584 549 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 SPATA31B1PQ5VZV4 182 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 Q6ZRG5 221 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 HSD17B11Q8NBQ5 300 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 OR1L4Q8NGR5 311 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 GPR82Q96P67 336 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 ASCL2Q99929 193 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 TUBA4BQ9H853 241 aa9.51□□□□□ -0.89
COL18A1-206ENST00000459895 HUWE1Q7Z6Z7 4374 aaKnown RBP9.51□□□□□ -0.89
COL18A1-206ENST00000459895 ELOA3CA0A087WX78 387 aaPredicted RBP9.5□□□□□ -0.89
COL18A1-206ENST00000459895 A0A087X0K7 114 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 C17orf112F2Z3M2 114 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 RPL7P18124 248 aaKnown RBP9.5□□□□□ -0.89
COL18A1-206ENST00000459895 ATF4P18848 351 aaPredicted RBP9.5□□□□□ -0.89
COL18A1-206ENST00000459895 S100A7P31151 101 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 FFAR4Q5NUL3 377 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 ZNF709Q8N972 641 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 SCGB1C1Q8TD33 95 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 SH3BGRL3Q9H299 93 aa9.5□□□□□ -0.89
COL18A1-206ENST00000459895 PSMB3P49720 205 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 ZNF345Q14585 488 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 RPL7L1Q6DKI1 246 aaKnown RBP9.49□□□□□ -0.89
COL18A1-206ENST00000459895 LINC00322Q6ZN03 302 aaPredicted RBP9.49□□□□□ -0.89
COL18A1-206ENST00000459895 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 TCTE3Q8IZS6 198 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 DNAJC4Q9NNZ3 241 aa9.49□□□□□ -0.89
COL18A1-206ENST00000459895 KNCNA6PVL3 124 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 H3BTX0 84 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 SLC17A3O00476 420 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 SNRPCP09234 159 aaKnown RBP9.48□□□□□ -0.89
COL18A1-206ENST00000459895 IGLC2P0DOY2 106 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 MEOX2P50222 304 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 DEFB1P60022 68 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 RAB2AP61019 212 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 SNRPD3P62318 126 aaKnown RBP9.48□□□□□ -0.89
COL18A1-206ENST00000459895 CD300CQ08708 224 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 MIR17HGQ75NE6 70 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 AKAP14Q86UN6 197 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 SLC25A2Q9BXI2 301 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 MFFQ9GZY8 342 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 SEPSECSQ9HD40 501 aaKnown RBP9.48□□□□□ -0.89
COL18A1-206ENST00000459895 RETNQ9HD89 108 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 TIMM9Q9Y5J7 89 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 TGP01266 2768 aa9.48□□□□□ -0.89
COL18A1-206ENST00000459895 TENM3Q9P273 2699 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 TRAV8-2A0A0B4J237 113 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 ISLRO14498 428 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 EIF3GO75821 320 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL18A1-206ENST00000459895 PYYP10082 97 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 RPL35AP18077 110 aaKnown RBP9.47□□□□□ -0.89
COL18A1-206ENST00000459895 CXCL2P19875 107 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 ATP6V0CP27449 155 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 HAGHQ16775 308 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 FAM78BQ5VT40 261 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 IGFL4Q6B9Z1 124 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 BPIFA4PQ86YQ2 179 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 KCNRGQ8N5I3 272 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 RNF182Q8N6D2 247 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 C16orf92Q96LL3 132 aa9.47□□□□□ -0.89
COL18A1-206ENST00000459895 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
COL18A1-206ENST00000459895 LOC102724200A0A096LPH7 203 aaPredicted RBP9.46□□□□□ -0.9
COL18A1-206ENST00000459895 HMSDA8MTL9 139 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 H3BQ15 152 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 HLA-DMBP28068 263 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 ACTL10Q5JWF8 245 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 SAMD13Q5VXD3 122 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 LCN15Q6UWW0 184 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.9
COL18A1-206ENST00000459895 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 FAM167A-AS1Q96KT0 104 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 TM2D3Q9BRN9 247 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 PSMG3Q9BT73 122 aaPredicted RBP9.46□□□□□ -0.9
COL18A1-206ENST00000459895 CYTL1Q9NRR1 136 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 RNF24Q9Y225 148 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 FUT9Q9Y231 359 aa9.46□□□□□ -0.9
COL18A1-206ENST00000459895 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
COL18A1-206ENST00000459895 BCL2L11O43521 198 aa9.45□□□□□ -0.9
COL18A1-206ENST00000459895 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
COL18A1-206ENST00000459895 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms