RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 H0Y8G0 127 aa11.23□□□□□ -0.61
SCFD1-203ENST00000458591 CSN3P07498 182 aa11.23□□□□□ -0.61
SCFD1-203ENST00000458591 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
SCFD1-203ENST00000458591 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
SCFD1-203ENST00000458591 TEX45Q8NA69 505 aa11.23□□□□□ -0.61
SCFD1-203ENST00000458591 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
SCFD1-203ENST00000458591 ASH1LQ9NR48 2969 aaKnown RBP11.23□□□□□ -0.61
SCFD1-203ENST00000458591 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
SCFD1-203ENST00000458591 IGHV1-24A0A0C4DH33 117 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 hDV102S1A0JD36 115 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 IGLV1-47P01700 117 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 IGLC1P0CG04 106 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 ETFRF1Q6IPR1 90 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
SCFD1-203ENST00000458591 PMCHL2Q9BQD1 86 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 SLC25A39Q9BZJ4 359 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-203ENST00000458591 HIGD1AQ9Y241 93 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 ARHGAP32A7KAX9 2087 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 CEP295Q9C0D2 2601 aa11.22□□□□□ -0.61
SCFD1-203ENST00000458591 A8MWL6 223 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 CT83Q5H943 113 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 PVRIGQ6DKI7 326 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 C8orf31Q8N9H6 132 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 OR4F17Q8NGA8 305 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 LINC01560Q8TB33 94 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
SCFD1-203ENST00000458591 DAZAP1Q96EP5 407 aaKnown RBP11.21□□□□□ -0.61
SCFD1-203ENST00000458591 ST20Q9HBF5 79 aa11.21□□□□□ -0.61
SCFD1-203ENST00000458591 OR4C46A6NHA9 309 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 OVOL3O00110 214 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 Q86TA4 180 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 FMC1Q96HJ9 113 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 C1RLQ9NZP8 487 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 JKAMPQ9P055 326 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 KAAG1Q9UBP8 84 aa11.21□□□□□ -0.62
SCFD1-203ENST00000458591 I3L2K1 104 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 COL8A1P27658 744 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
SCFD1-203ENST00000458591 PLGLAQ15195 96 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 C22orf15Q8WYQ4 148 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 RALYQ9UKM9 306 aaKnown RBP11.2□□□□□ -0.62
SCFD1-203ENST00000458591 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
SCFD1-203ENST00000458591 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
SCFD1-203ENST00000458591 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 M0R3E3 92 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 HILPDAQ9Y5L2 63 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-203ENST00000458591 LEPROTL1O95214 131 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 FOXE3Q13461 319 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 RBPMS2Q6ZRY4 209 aaKnown RBP11.19□□□□□ -0.62
SCFD1-203ENST00000458591 OR4C5Q8NGB2 326 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 TPPP3Q9BW30 176 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 GFRA4Q9GZZ7 299 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
SCFD1-203ENST00000458591 ABCA4P78363 2273 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 PPIAL4CA0A0B4J2A2 164 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 K7EP13 123 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 CNIH1O95406 144 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-203ENST00000458591 PPIAL4GP0DN37 164 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 MUC21Q5SSG8 566 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 RPEQ96AT9 228 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 RASL11BQ9BPW5 248 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 TLN1Q9Y490 2541 aaKnown RBP11.18□□□□□ -0.62
SCFD1-203ENST00000458591 PTPRZ1P23471 2315 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-203ENST00000458591 LOC102724200A0A096LPH7 203 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-203ENST00000458591 IGHV2-70DA0A0C4DH43 119 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 CHEK1O14757 476 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 CRIP1P50238 77 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 RNASE8Q8TDE3 154 aaKnown RBP11.18□□□□□ -0.62
SCFD1-203ENST00000458591 ONECUT1Q9UBC0 465 aa11.18□□□□□ -0.62
SCFD1-203ENST00000458591 K7EIM0 57 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 TIMM23O14925 209 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 PLP1P60201 277 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 KLRD1Q13241 179 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 LIPFP07098 398 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 C8orf49Q96NF6 230 aa11.17□□□□□ -0.62
SCFD1-203ENST00000458591 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 APOBEC3AP31941 199 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-203ENST00000458591 RBX1P62877 108 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 VAMP3Q15836 100 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms