RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DNAJC9-AS1A6NH13 148 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 H3BRN7 92 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 ELANEP08246 267 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 CTSGP08311 255 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 ARL3P36405 182 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 CEBPGP53567 150 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 CFHR3Q02985 330 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 PNRC1Q12796 327 aaPredicted RBP6.94□□□□□ -1.3
VPS50-207ENST00000458530 FOXE3Q13461 319 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 TEX38Q6PEX7 206 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 CLEC19AQ6UXS0 136 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 PATE2Q6UY27 113 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 BPIFA4PQ86YQ2 179 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 Q8N2B8 174 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 OR4F17Q8NGA8 305 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 RPUSD4Q96CM3 377 aaKnown RBP6.94□□□□□ -1.3
VPS50-207ENST00000458530 CCDC140Q96MF4 163 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 NOL4LQ96MY1 436 aaPredicted RBP6.94□□□□□ -1.3
VPS50-207ENST00000458530 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 SLC25A39Q9BZJ4 359 aaPredicted RBP6.94□□□□□ -1.3
VPS50-207ENST00000458530 ZNF702PQ9H963 129 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 MRPL27Q9P0M9 148 aaKnown RBP6.94□□□□□ -1.3
VPS50-207ENST00000458530 LINC00527Q9UJ94 153 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 PUS1Q9Y606 427 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS50-207ENST00000458530 S4R3C0 116 aa6.94□□□□□ -1.3
VPS50-207ENST00000458530 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.93□□□□□ -1.3
VPS50-207ENST00000458530 FAM74A7A6NL05 159 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 C9JQL5 133 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 IGHV3-23P01764 117 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 CLEC3BP05452 202 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 RPL7P18124 248 aaKnown RBP6.93□□□□□ -1.3
VPS50-207ENST00000458530 ADCYAP1P18509 176 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 CD81P60033 236 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 UBE2G2P60604 165 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 RHEBQ15382 184 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 FAM167A-AS1Q96KT0 104 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 GPR82Q96P67 336 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 METTL26Q96S19 204 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 PRELID1Q9Y255 219 aa6.93□□□□□ -1.3
VPS50-207ENST00000458530 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 B4DEV8 164 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 M0R036 132 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 NDUFA4O00483 81 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 EIF3GO75821 320 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS50-207ENST00000458530 OR10J4P0C629 311 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 HIST1H1EP10412 219 aaKnown RBP6.92□□□□□ -1.3
VPS50-207ENST00000458530 PSMB8P28062 276 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 BMI1P35226 326 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 MEOX2P50222 304 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 DEFA6Q01524 100 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 ZNF343Q6P1L6 599 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 C3orf56Q8N813 242 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 TVP23CQ96ET8 276 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 CHRDL1Q9BU40 450 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
VPS50-207ENST00000458530 TRAV5A0A0B4J249 113 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 ZNF98A6NK75 572 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 GGCTO75223 188 aaKnown RBP6.91□□□□□ -1.3
VPS50-207ENST00000458530 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
VPS50-207ENST00000458530 RNASE1P07998 156 aaKnown RBP6.91□□□□□ -1.3
VPS50-207ENST00000458530 NBEAP1P0C6P0 100 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 GP9P14770 177 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 ADMP35318 185 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 ATP5G3P48201 142 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 HILS1P60008 231 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 PDE6HQ13956 83 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
VPS50-207ENST00000458530 C1orf194Q5T5A4 169 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 FAM90A2PQ658T7 463 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 LYPD1Q8N2G4 141 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 CLRN3Q8NCR9 226 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 OR4X2Q8NGF9 303 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 C11orf52Q96A22 123 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 FXYD5Q96DB9 178 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 ZNF503Q96F45 646 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 GRAMD2BQ96HH9 432 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 ZNF747Q9BV97 191 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 ELOVL1Q9BW60 279 aa6.91□□□□□ -1.3
VPS50-207ENST00000458530 YTHDF2Q9Y5A9 579 aaKnown RBP6.91□□□□□ -1.3
VPS50-207ENST00000458530 A0A1W2PS18 150 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 H3BQ15 152 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 PYYP10082 97 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
VPS50-207ENST00000458530 NPPCP23582 126 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 GALR1P47211 349 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 PSG9Q00887 426 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 GUCA2BQ16661 112 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 TMEM241Q24JQ0 296 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 TMEM95Q3KNT9 176 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 FAM106AQ4KMX7 169 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 AWAT1Q58HT5 328 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 OR8I2Q8N0Y5 310 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 RNF152Q8N8N0 203 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 HIST1H2BAQ96A08 127 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms