RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SUMO3P55854 103 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 GUSBP11Q6P575 273 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 BORCS7Q96B45 105 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 PEF1Q9UBV8 284 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 NPIPA3F8WFD2 350 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 TRAPPC2LH3BP13 241 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 GRPP07492 148 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 SLC25A2Q9BXI2 301 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 TMEM14BQ9NUH8 114 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 TMEM140Q9NV12 185 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A10PA6NDY2 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A18PA6NE21 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A16PA6NEW6 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A20PA6NIJ5 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A8PA6NJQ4 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A7PA6NKC0 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 ANKRD30BLA7E2S9 258 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A22PA8MWA6 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A12PA8MX19 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A5PA8MXJ8 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A23PA8MXZ1 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 NPIPB6E9PJ23 425 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 ELANEP08246 267 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A15PP0C7V4 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A13PP0C7W8 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A14PP0C7W9 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 FAM90A24PP0C7X0 464 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 CCL5P13501 91 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 CNN3Q15417 329 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 CD300EQ496F6 205 aaPredicted RBP3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 AMN1Q8IY45 258 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 ZCCHC24Q8N2G6 241 aaKnown RBP3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 TMEM251Q8N6I4 163 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 TMEM105Q8N8V8 129 aa3.59□□□□□ -1.83
DEPDC1-202ENST00000456315 IGKV1D-17A0A075B6S4 117 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 HIST1H1EP10412 219 aaKnown RBP3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 CRIP2P52943 208 aaPredicted RBP3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 PLP1P60201 277 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 HTD2P86397 168 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 SPINK14Q6IE38 97 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 C12orf54Q6X4T0 127 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 C8orf46Q8TAG6 207 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 SAP30LQ9HAJ7 183 aa3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 COLQQ9Y215 455 aaPredicted RBP3.59□□□□□ -1.84
DEPDC1-202ENST00000456315 IGHV3-21A0A0B4J1V1 117 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 IGHV1OR15-9A0A0B4J2B8 117 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 PRR33A8MZF0 331 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 E9PLD3 99 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 CD27P26842 260 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 VEGFBP49765 207 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 ARF6P62330 175 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 HERV-K104P63124 156 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 HIST1H1AQ02539 215 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 TIGITQ495A1 244 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 INO80CQ6PI98 192 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 GCSAMQ8N6F7 178 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 SNIP1Q8TAD8 396 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 DEFB104AQ8WTQ1 72 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 SIGLEC8Q9NYZ4 499 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 LY96Q9Y6Y9 160 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 FLNBO75369 2602 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 STAB1Q9NY15 2570 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 B5MCH6 92 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 C5orf67F2Z3F1 127 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 RBP4P02753 201 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 AMY1AP04745 511 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 REG1BP48304 166 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 EDDM3AQ14507 147 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 TBC1D28Q2M2D7 210 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 NINJ1Q92982 152 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF71Q9NQZ8 489 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 MPDU1O75352 247 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 GNG3P63215 75 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 RTL8BQ17RB0 113 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF672Q499Z4 452 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 H2BFWTQ7Z2G1 175 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF645Q8N7E2 425 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 RND1Q92730 232 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 CORO2AQ92828 525 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 SPRY4Q9C004 299 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 A0A1W2PNU3 283 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 RNASE2P10153 161 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF80P51504 273 aaPredicted RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 FAM231DQ6ZW35 169 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 NPIPB3Q92617 1050 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 SPATA25Q9BR10 227 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 LIN7CQ9NUP9 197 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 AP5S1Q9NUS5 200 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 NHP2Q9NX24 153 aaKnown RBP3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 KLF12Q9Y4X4 402 aa3.58□□□□□ -1.84
DEPDC1-202ENST00000456315 H3BRM9 83 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 ZFAND5O76080 213 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 IGHG4P01861 327 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 CYC1P08574 325 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 MC5RP33032 325 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 ZNF479Q96JC4 524 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 LOC389332A0A1B0GUA5 103 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 J3QT63 122 aa3.57□□□□□ -1.84
DEPDC1-202ENST00000456315 APOA2P02652 100 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms