RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 PEF1Q9UBV8 284 aaKnown RBP3.98□□□□□ -1.77
SCN11A-203ENST00000456224 LINC00205P59089 165 aa3.98□□□□□ -1.77
SCN11A-203ENST00000456224 RPL15P61313 204 aaKnown RBP3.98□□□□□ -1.77
SCN11A-203ENST00000456224 FABP2P12104 132 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 WT1P19544 449 aaPredicted RBP3.97□□□□□ -1.77
SCN11A-203ENST00000456224 NMUP48645 174 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 ZNF138P52744 262 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 DUX4L9Q6RFH8 374 aaPredicted RBP3.97□□□□□ -1.77
SCN11A-203ENST00000456224 C2orf88Q9BSF0 95 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 WT1-ASQ06250 92 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 COA6Q5JTJ3 125 aaKnown RBP3.97□□□□□ -1.77
SCN11A-203ENST00000456224 WFDC3Q8IUB2 231 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 IGF2BP2-AS1Q96M15 143 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 TMEM208Q9BTX3 173 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 IGLC7A0M8Q6 106 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 SMIM13P0DJ93 91 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 RNASE4P34096 147 aaKnown RBP3.97□□□□□ -1.77
SCN11A-203ENST00000456224 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
SCN11A-203ENST00000456224 PAX2Q02962 417 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 GFI1BQ5VTD9 330 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 C11orf42Q8N5U0 333 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 KMT2EQ8IZD2 1858 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 EML6Q6ZMW3 1958 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 LOC102724200A0A096LPH7 203 aaPredicted RBP3.97□□□□□ -1.77
SCN11A-203ENST00000456224 IGHV1-69DA0A0B4J2H0 117 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 GGTLC3B5MD39 225 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 IGHV1-69P01742 117 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 GNLYP22749 145 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 LAGE3Q14657 143 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 OR9G4Q8NGQ1 327 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 MRAP2Q96G30 205 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 EP400Q96L91 3159 aa3.97□□□□□ -1.77
SCN11A-203ENST00000456224 SRRM4A7MD48 611 aaKnown RBP3.96□□□□□ -1.77
SCN11A-203ENST00000456224 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.96□□□□□ -1.77
SCN11A-203ENST00000456224 NDUFA4O00483 81 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 TCF21O43680 179 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 LGALS3P17931 250 aaKnown RBP3.96□□□□□ -1.77
SCN11A-203ENST00000456224 CTAG1AP78358 180 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 Q1RN00 199 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 LCN12Q6JVE5 192 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 ZNF841Q6ZN19 808 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 VPS25Q9BRG1 176 aa3.96□□□□□ -1.77
SCN11A-203ENST00000456224 IGLC1P0CG04 106 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 GZMBP10144 247 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 DLX1P56177 255 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 PRR30Q53SZ7 412 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 PYY3Q5JQD4 70 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 Q5PR19 223 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 Q6ZPA2 131 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 CITED1Q99966 193 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SSBP4Q9BWG4 385 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 CTSZQ9UBR2 303 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 A0A1B0GV90 55 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 DPM2O94777 84 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 NUTF2P61970 127 aaKnown RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 DAZAP2Q15038 168 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 LYZL1Q6UWQ5 148 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 EXOC3-AS1Q8N2X6 119 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 JMJD8Q96S16 334 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 ALKBH7Q9BT30 221 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 IGKV2-40A0A087WW87 121 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 TRAV40A0A0B4J280 105 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 CGB1A6NKQ9 187 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 K7EN84 100 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 IGKV2D-40P01614 121 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 CGB3P0DN86 165 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 CGB7P0DN87 165 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 CNTFRP26992 372 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SAA4P35542 130 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 TCTAP57738 103 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SEC11AP67812 179 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SPRNQ5BIV9 151 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 BOD1L2Q8IYS8 172 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 SCGB3A1Q96QR1 104 aa3.96□□□□□ -1.78
SCN11A-203ENST00000456224 MRPS16Q9Y3D3 137 aaKnown RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 PHF3Q92576 2039 aaKnown RBP3.96□□□□□ -1.78
SCN11A-203ENST00000456224 UBE2L6O14933 153 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 ZNF207O43670 478 aaKnown RBP3.95□□□□□ -1.78
SCN11A-203ENST00000456224 IGKCP01834 107 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 FOXA3P55318 350 aaPredicted RBP3.95□□□□□ -1.78
SCN11A-203ENST00000456224 SRSF9Q13242 221 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN11A-203ENST00000456224 ZNF56Q15929 161 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 RNF151Q2KHN1 245 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 WI2-2373I1.2A0A1W2PRP0 233 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 GAGE10A6NGK3 116 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 I3L2K1 104 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 RPL13AP40429 203 aaKnown RBP3.95□□□□□ -1.78
SCN11A-203ENST00000456224 S4R3C0 116 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 IGHV3OR16-10A0A075B7F0 116 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 NDUFA3O95167 84 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 PLNP26678 52 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 DGAT2L7PQ6IED9 249 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 FAM19A2Q8N3H0 131 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 DPH3P1Q9H4G8 78 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 NCKAP5O14513 1909 aa3.95□□□□□ -1.78
SCN11A-203ENST00000456224 TNRC6AQ8NDV7 1962 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms