RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
HDAC9-218ENST00000456174 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
HDAC9-218ENST00000456174 ZNF497Q6ZNH5 498 aa6.16□□□□□ -1.42
HDAC9-218ENST00000456174 NUP37Q8NFH4 326 aa6.16□□□□□ -1.42
HDAC9-218ENST00000456174 VCX2Q9H322 139 aa6.16□□□□□ -1.42
HDAC9-218ENST00000456174 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
HDAC9-218ENST00000456174 IGKV1-6A0A0C4DH72 117 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 SPRY3O43610 288 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 MPDU1O75352 247 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 CT45A10P0DMU9 189 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 MFAP2P55001 183 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 BSPH1Q075Z2 132 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 FHL3Q13643 280 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 SPRNQ5BIV9 151 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 PQLC2Q6ZP29 291 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 FAM231DQ6ZW35 169 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 IL1F10Q8WWZ1 152 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 NRGNQ92686 78 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 PRORYQ9H606 182 aa6.15□□□□□ -1.42
HDAC9-218ENST00000456174 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
HDAC9-218ENST00000456174 CCL21O00585 134 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 PSPNO60542 156 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 FOXH1O75593 365 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 APOMO95445 188 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 RTL8BQ17RB0 113 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 OR51H1Q8NH63 302 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 IGF2BP2-AS1Q96M15 143 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 PPDPFQ9H3Y8 114 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 ICE1Q9Y2F5 2266 aa6.15□□□□□ -1.43
HDAC9-218ENST00000456174 PLCE1Q9P212 2302 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 SRRM5B3KS81 715 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 IGLL5B9A064 214 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 RHODO00212 210 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 TFF1P04155 84 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 PRTN3P24158 256 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 LY6DQ14210 128 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 PCSK4Q6UW60 755 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 TEX29Q8N6K0 151 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 NUP35Q8NFH5 326 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 ITLN1Q8WWA0 313 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 GLMPQ8WWB7 406 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-218ENST00000456174 IDI2-AS1Q9NZ38 188 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 TEX50A0A1B0GTY4 177 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 PRSS29PA6NIE9 313 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 FAM90A27PA6NNH2 459 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 FAM90A9PA6NNJ1 464 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 NPIPB5A8MRT5 1133 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 H3BMG7 143 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 CCDC179H3BU77 68 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.14□□□□□ -1.43
HDAC9-218ENST00000456174 P0C879 139 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 G6PCP35575 357 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 FXYD2P54710 66 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 CD177Q8N6Q3 437 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 PRELID3AQ96N28 172 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 NGBQ9NPG2 151 aa6.14□□□□□ -1.43
HDAC9-218ENST00000456174 DYSFO75923 2080 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 POLEQ07864 2286 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 CHD8Q9HCK8 2581 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM30CPA0ZSE6 113 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 IGHV1-46P01743 117 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 PRDX2P32119 198 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 NDUFV3P56181 108 aaKnown RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 ATP5IP56385 69 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 EDDM3BP56851 147 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 TNFAIP6P98066 277 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 LCE2DQ5TA82 110 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 FAM90A1Q86YD7 464 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 SLC25A33Q9BSK2 321 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 MCRIP2Q9BUT9 160 aaKnown RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 ZNF747Q9BV97 191 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 LIN7CQ9NUP9 197 aaKnown RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 CACNA1DQ01668 2161 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 NCOR2Q9Y618 2525 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 RAI1Q7Z5J4 1906 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-218ENST00000456174 IGKV1D-17A0A075B6S4 117 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM8BA6NDV4 472 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 LHBP01229 141 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 GATA4P43694 442 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 DIAPH2-AS1Q14236 149 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 PSG5Q15238 335 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 LGALS9BQ3B8N2 356 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 PRR31Q5SQ13 230 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 LGALS9CQ6DKI2 356 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 UBALD1Q8TB05 177 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 RNF125Q96EQ8 232 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 COQ2Q96H96 371 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 TMEM126AQ9H061 195 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 PIEZO1Q92508 2521 aa6.13□□□□□ -1.43
HDAC9-218ENST00000456174 ZZEF1O43149 2961 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 DSCAMO60469 2012 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 IGHV3OR15-7A0A075B7D8 119 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 NPIPB11E5RHQ5 1161 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 FCN3O75636 299 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 NCR2O95944 276 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 TGFAP01135 160 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
HDAC9-218ENST00000456174 PIFOQ8TCI5 191 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms