RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 TOX4O94842 621 aa11.85□□□□□ -0.51
LDLR-202ENST00000455727 IGLV2-11P01706 119 aa11.85□□□□□ -0.51
LDLR-202ENST00000455727 GPX1P07203 203 aa11.85□□□□□ -0.51
LDLR-202ENST00000455727 FAM106CPP0CH98 169 aa11.85□□□□□ -0.51
LDLR-202ENST00000455727 SRIP30626 198 aa11.85□□□□□ -0.51
LDLR-202ENST00000455727 LINC00322Q6ZN03 302 aaPredicted RBP11.85□□□□□ -0.51
LDLR-202ENST00000455727 NDUFAF3Q9BU61 184 aa11.85□□□□□ -0.51
LDLR-202ENST00000455727 SOX21Q9Y651 276 aaPredicted RBP11.85□□□□□ -0.51
LDLR-202ENST00000455727 A0A1B0GXF2 115 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 NPIPB6E9PJ23 425 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 F8W735 103 aaPredicted RBP11.84□□□□□ -0.51
LDLR-202ENST00000455727 P01737 135 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 SSTP61278 116 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 LMO4P61968 165 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 SLAQ13239 276 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
LDLR-202ENST00000455727 EXOC3-AS1Q8N2X6 119 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
LDLR-202ENST00000455727 OR2J3O76001 311 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 SIGLEC15Q6ZMC9 328 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 TMEM75Q8N9X5 138 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 DAZAP1Q96EP5 407 aaKnown RBP11.83□□□□□ -0.51
LDLR-202ENST00000455727 TBX15Q96SF7 602 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 HSPB9Q9BQS6 159 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 SAMD10Q9BYL1 202 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.51
LDLR-202ENST00000455727 IGHV7-81A0A0B4J1V7 117 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 HLA-DRB1P01911 266 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 EGR2P11161 476 aaPredicted RBP11.83□□□□□ -0.52
LDLR-202ENST00000455727 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
LDLR-202ENST00000455727 PDE6HQ13956 83 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 GDF5OSQ5U4N7 250 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 GOLT1AQ6ZVE7 132 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 Q8N9W7 124 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 KCNS1Q96KK3 526 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 TXN2Q99757 166 aa11.83□□□□□ -0.52
LDLR-202ENST00000455727 KLK9Q2XQG4 91 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 C1orf194Q5T5A4 169 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 OR4B1Q8NGF8 309 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 ZNF414Q96IQ9 312 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 KLK9Q9UKQ9 250 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 ZFP30Q9Y2G7 519 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 NCOR2Q9Y618 2525 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 K7EQM0 130 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 OVOL3O00110 214 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 LPAR2Q9HBW0 351 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 CHD8Q9HCK8 2581 aa11.82□□□□□ -0.52
LDLR-202ENST00000455727 A0A1W2PS18 150 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 NDUFB8O95169 186 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 KLF5Q13887 457 aaPredicted RBP11.81□□□□□ -0.52
LDLR-202ENST00000455727 Q56UQ5 140 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 C16orf54Q6UWD8 224 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 C17orf77Q96MU5 243 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 POLR3KQ9Y2Y1 108 aaPredicted RBP11.81□□□□□ -0.52
LDLR-202ENST00000455727 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 C19orf84I3L1E1 186 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 RNF224P0DH78 156 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 GNLYP22749 145 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 UQCRFS1P47985 274 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 HBBP68871 147 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
LDLR-202ENST00000455727 PRNTQ86SH4 94 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 RCHY1Q96PM5 261 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 BPESC1Q9GZL8 116 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 S4R3C0 116 aa11.81□□□□□ -0.52
LDLR-202ENST00000455727 TCF24Q7RTU0 167 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 VN1R17PQ8TDU5 208 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 ITPR1Q14643 2758 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 COL8A1P27658 744 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
LDLR-202ENST00000455727 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 CIARTQ8N365 385 aaPredicted RBP11.8□□□□□ -0.52
LDLR-202ENST00000455727 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
LDLR-202ENST00000455727 ZNF705FA8MVS1 300 aaPredicted RBP11.79□□□□□ -0.52
LDLR-202ENST00000455727 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
LDLR-202ENST00000455727 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
LDLR-202ENST00000455727 CTSGP08311 255 aa11.79□□□□□ -0.52
LDLR-202ENST00000455727 ZNF705DP0CH99 300 aaPredicted RBP11.79□□□□□ -0.52
LDLR-202ENST00000455727 ZNF705BP0CI00 300 aaPredicted RBP11.79□□□□□ -0.52
LDLR-202ENST00000455727 SAA4P35542 130 aa11.79□□□□□ -0.52
LDLR-202ENST00000455727 CAMPP49913 170 aa11.79□□□□□ -0.52
LDLR-202ENST00000455727 PSG3Q16557 428 aa11.79□□□□□ -0.52
LDLR-202ENST00000455727 TEX43Q6ZNM6 134 aa11.79□□□□□ -0.52
LDLR-202ENST00000455727 FAM110DQ8TAY7 271 aaPredicted RBP11.79□□□□□ -0.52
LDLR-202ENST00000455727 ALKBH7Q9BT30 221 aaPredicted RBP11.79□□□□□ -0.52
LDLR-202ENST00000455727 SERTM2A0A1B0GWG4 89 aa11.78□□□□□ -0.52
LDLR-202ENST00000455727 CD33P20138 364 aa11.78□□□□□ -0.52
LDLR-202ENST00000455727 AMTP48728 403 aa11.78□□□□□ -0.52
LDLR-202ENST00000455727 FAM120AOSQ5T036 256 aa11.78□□□□□ -0.52
LDLR-202ENST00000455727 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
LDLR-202ENST00000455727 FBXL7Q9UJT9 491 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms