RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 ACOT6Q3I5F7 207 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-204ENST00000452182 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
SCN9A-204ENST00000452182 GPR82Q96P67 336 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 SH3BGRL3Q9H299 93 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 SLC25A32Q9H2D1 315 aa8.73□□□□□ -1.01
SCN9A-204ENST00000452182 IGHV3-66A0A0C4DH42 116 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 TSPAN4O14817 238 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 EGFEM1PQ0D2K5 195 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 LCN12Q6JVE5 192 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 TMEM61Q8N0U2 210 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 SCRT1Q9BWW7 348 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 MRPL32Q9BYC8 188 aaKnown RBP8.72□□□□□ -1.01
SCN9A-204ENST00000452182 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
SCN9A-204ENST00000452182 ZMAT5Q9UDW3 170 aaKnown RBP8.72□□□□□ -1.01
SCN9A-204ENST00000452182 RFNGQ9Y644 331 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 SIGLEC15Q6ZMC9 328 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 RBPMS2Q6ZRY4 209 aaKnown RBP8.72□□□□□ -1.01
SCN9A-204ENST00000452182 TCF24Q7RTU0 167 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 OR8I2Q8N0Y5 310 aa8.72□□□□□ -1.01
SCN9A-204ENST00000452182 TRAV2A0A0B4J234 112 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 G3V4G9 280 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 BOLA2-SMG1P6H3BVE0 249 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 RPL7P18124 248 aaKnown RBP8.71□□□□□ -1.02
SCN9A-204ENST00000452182 RHOBP62745 196 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 MORN5Q5VZ52 161 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 EIF5AL1Q6IS14 154 aaKnown RBP8.71□□□□□ -1.02
SCN9A-204ENST00000452182 OR10G4Q8NGN3 311 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 OR10G9Q8NGN4 311 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 OR10G7Q8NGN6 311 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 SPAG8Q99932 426 aaPredicted RBP8.71□□□□□ -1.02
SCN9A-204ENST00000452182 SLC25A22Q9H936 323 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 FUT9Q9Y231 359 aa8.71□□□□□ -1.02
SCN9A-204ENST00000452182 NOTCH3Q9UM47 2321 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 ZNF785A8K8V0 405 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 UMAD1C9J7I0 102 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 GALR1P47211 349 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 RAB2AP61019 212 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 TMEM41BQ5BJD5 291 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 KPRPQ5T749 579 aaPredicted RBP8.7□□□□□ -1.02
SCN9A-204ENST00000452182 LEMD1Q68G75 181 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 BPIFA4PQ86YQ2 179 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 RPP25LQ8N5L8 163 aaKnown RBP8.7□□□□□ -1.02
SCN9A-204ENST00000452182 RPRMQ9NS64 109 aa8.7□□□□□ -1.02
SCN9A-204ENST00000452182 IZUMO1RA6ND01 250 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
SCN9A-204ENST00000452182 PAFAH1B2P68402 229 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 MIR17HGQ75NE6 70 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 STXBP6Q8NFX7 210 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 PHYHIPLQ96FC7 376 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 MS4A6AQ9H2W1 248 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 TMEM14CQ9P0S9 112 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 A0A087X0K7 114 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 TRAV5A0A0B4J249 113 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 A0A1W2PPV4 95 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 MEOX2P50222 304 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 TAS2R45P59539 299 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 RPL11P62913 178 aaKnown RBP8.69□□□□□ -1.02
SCN9A-204ENST00000452182 BEAN1Q3B7T3 259 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 SAMD13Q5VXD3 122 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 SPATA31B1PQ5VZV4 182 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 DCANP1Q8TF63 244 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 TMED6Q8WW62 240 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 FAM167A-AS1Q96KT0 104 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 SLC25A2Q9BXI2 301 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 NRN1Q9NPD7 142 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 ZNF256Q9Y2P7 627 aaPredicted RBP8.69□□□□□ -1.02
SCN9A-204ENST00000452182 SELENOKQ9Y6D0 94 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 SMAD5-AS1Q9Y6J3 95 aa8.69□□□□□ -1.02
SCN9A-204ENST00000452182 MGAM2Q2M2H8 2515 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 OR4C46A6NHA9 309 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 IGLC2P0DOY2 106 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 GP9P14770 177 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 CDC34P49427 236 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-204ENST00000452182 KHDC3LQ587J8 217 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 FAM122CQ6P4D5 195 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 DPPA3Q6W0C5 159 aa8.68□□□□□ -1.02
SCN9A-204ENST00000452182 ACTR3CQ9C0K3 210 aaPredicted RBP8.68□□□□□ -1.02
SCN9A-204ENST00000452182 STAG3L2P0CL84 134 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 STAG3L3P0CL85 134 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 RAB5CP51148 216 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 KRTAP10-11P60412 298 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 GUK1Q16774 197 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 PQLC2Q6ZP29 291 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 FAM110AQ9BQ89 295 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 HRH4Q9H3N8 390 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 DNAH3Q8TD57 4116 aa8.67□□□□□ -1.02
SCN9A-204ENST00000452182 IGKV3-7A0A075B6H7 116 aa8.66□□□□□ -1.02
SCN9A-204ENST00000452182 CTXND1A0A1B0GTU2 59 aa8.66□□□□□ -1.02
SCN9A-204ENST00000452182 K7EQG2 157 aa8.66□□□□□ -1.02
SCN9A-204ENST00000452182 DNASE2O00115 360 aaPredicted RBP8.66□□□□□ -1.02
SCN9A-204ENST00000452182 SOCS3O14543 225 aa8.66□□□□□ -1.02
SCN9A-204ENST00000452182 HIST1H1EP10412 219 aaKnown RBP8.66□□□□□ -1.02
SCN9A-204ENST00000452182 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms