RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 A0A0U1RQK1 487 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 SLC17A3O00476 420 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 GCGP01275 180 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 TAS2R60P59551 318 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 CX3CL1P78423 397 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 HIGD1AQ9Y241 93 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 SOX21Q9Y651 276 aaPredicted RBP8.41□□□□□ -1.06
PKP4-206ENST00000452162 V9GYV3 84 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 IGLV11-55A0A075B6I3 123 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 PEX7O00628 323 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 S100A9P06702 114 aaKnown RBP8.41□□□□□ -1.06
PKP4-206ENST00000452162 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 RASL11BQ9BPW5 248 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 PITPNC1Q9UKF7 332 aa8.41□□□□□ -1.06
PKP4-206ENST00000452162 CENPVL3A0A0U1RRI6 287 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 NCBP2LA6PVI3 153 aaKnown RBP8.4□□□□□ -1.06
PKP4-206ENST00000452162 ERVFC1-1P60608 527 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 LYZP61626 148 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 BRD3OSQ6XYD6 125 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 BCL6BQ8N143 479 aaPredicted RBP8.4□□□□□ -1.06
PKP4-206ENST00000452162 TEX29Q8N6K0 151 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 GPR61Q9BZJ8 451 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 OSTCQ9NRP0 149 aa8.4□□□□□ -1.06
PKP4-206ENST00000452162 MRPL27Q9P0M9 148 aaKnown RBP8.4□□□□□ -1.06
PKP4-206ENST00000452162 ISLRO14498 428 aa8.4□□□□□ -1.07
PKP4-206ENST00000452162 CNN1P51911 297 aaKnown RBP8.4□□□□□ -1.07
PKP4-206ENST00000452162 RIPPLY3P57055 190 aa8.4□□□□□ -1.07
PKP4-206ENST00000452162 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.07
PKP4-206ENST00000452162 TTC9CQ8N5M4 171 aa8.4□□□□□ -1.07
PKP4-206ENST00000452162 LINC00479Q96M42 142 aa8.4□□□□□ -1.07
PKP4-206ENST00000452162 SLC25A39Q9BZJ4 359 aaPredicted RBP8.4□□□□□ -1.07
PKP4-206ENST00000452162 GAR1Q9NY12 217 aaKnown RBP8.4□□□□□ -1.07
PKP4-206ENST00000452162 FABP1P07148 127 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 SNRPCP09234 159 aaKnown RBP8.39□□□□□ -1.07
PKP4-206ENST00000452162 NBEAP1P0C6P0 100 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 RD3LP0DJH9 198 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 EGR2P11161 476 aaPredicted RBP8.39□□□□□ -1.07
PKP4-206ENST00000452162 SAA4P35542 130 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 RANP62826 216 aaKnown RBP8.39□□□□□ -1.07
PKP4-206ENST00000452162 LEMD1Q68G75 181 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 Q8N9W7 124 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 BLNKQ8WV28 456 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 ZNF48Q96MX3 618 aaPredicted RBP8.39□□□□□ -1.07
PKP4-206ENST00000452162 TMEM14CQ9P0S9 112 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 IGHV7-81A0A0B4J1V7 117 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 TOMM40O96008 361 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 RPEL1Q2QD12 228 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
PKP4-206ENST00000452162 EPDR1Q9UM22 224 aa8.39□□□□□ -1.07
PKP4-206ENST00000452162 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
PKP4-206ENST00000452162 S100A2P29034 98 aa8.38□□□□□ -1.07
PKP4-206ENST00000452162 YPEL3P61236 119 aaPredicted RBP8.38□□□□□ -1.07
PKP4-206ENST00000452162 GNG5P63218 68 aa8.38□□□□□ -1.07
PKP4-206ENST00000452162 SRSF2Q01130 221 aaKnown RBP8.38□□□□□ -1.07
PKP4-206ENST00000452162 PDZD11Q5EBL8 140 aa8.38□□□□□ -1.07
PKP4-206ENST00000452162 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
PKP4-206ENST00000452162 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 IGHV1-69DA0A0B4J2H0 117 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 PGPA6NDG6 321 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 NPFFO15130 113 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 IGHV1-69P01742 117 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 HLA-DRB1P01911 266 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 SLC25A5P05141 298 aaKnown RBP8.37□□□□□ -1.07
PKP4-206ENST00000452162 MGST1P10620 155 aaKnown RBP8.37□□□□□ -1.07
PKP4-206ENST00000452162 HIST1H1BP16401 226 aaKnown RBP8.37□□□□□ -1.07
PKP4-206ENST00000452162 TMEM183BQ1AE95 376 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 PIP4P2Q8N4L2 257 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 ZNF491Q8N8L2 437 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 C1RLQ9NZP8 487 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 KLF12Q9Y4X4 402 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 TRAPPC1Q9Y5R8 145 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 FBN1P35555 2871 aaKnown RBP8.37□□□□□ -1.07
PKP4-206ENST00000452162 TRAV30A0A087WSZ9 112 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 WI2-2373I1.2A0A1W2PRP0 233 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 XKRY2A2RUG3 117 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 H3BRN7 92 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 BRS3P32247 399 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 TMEM95Q3KNT9 176 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 IBA57Q5T440 356 aaKnown RBP8.37□□□□□ -1.07
PKP4-206ENST00000452162 NHLRC2Q8NBF2 726 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 ZNF586Q9NXT0 402 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 S4R3C0 116 aa8.37□□□□□ -1.07
PKP4-206ENST00000452162 NDUFB8O95169 186 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 HIST1H1EP10412 219 aaKnown RBP8.36□□□□□ -1.07
PKP4-206ENST00000452162 MFAP4P55083 255 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 COTL1Q14019 142 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 FAM231DQ6ZW35 169 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 C5orf17Q8NAS9 161 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 OR10D4PQ8NGN7 298 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 HIST1H2BLQ99880 126 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 HSPB9Q9BQS6 159 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 ATG101Q9BSB4 218 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 Q9H3A6 140 aa8.36□□□□□ -1.07
PKP4-206ENST00000452162 H3BTX0 84 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms