RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PGPA6NDG6 321 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 SPINT2O43291 252 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 KIR2DS2P43631 304 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 MLANAQ16655 118 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 HES3Q5TGS1 186 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 Q6ZS52 159 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 YRDCQ86U90 279 aaKnown RBP6.9□□□□□ -1.3
LSM5-208ENST00000450169 GATD1Q8NB37 220 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 SRSF8Q9BRL6 282 aaKnown RBP6.9□□□□□ -1.3
LSM5-208ENST00000450169 PRNDQ9UKY0 176 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 CEP192Q8TEP8 1941 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 WDFY3Q8IZQ1 3526 aa6.9□□□□□ -1.3
LSM5-208ENST00000450169 IGHV1OR21-1A0A087WYE8 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 GAGE12JA6NER3 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 C10orf142B7Z368 130 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 OVOL3O00110 214 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 NDUFS7O75251 213 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 MRPL33O75394 65 aaKnown RBP6.9□□□□□ -1.31
LSM5-208ENST00000450169 GAGE7O76087 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 RBP4P02753 201 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 GAGE12FP0CL80 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 GAGE12GP0CL81 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 GAGE12IP0CL82 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 CFHR2P36980 270 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 GAGE4Q13068 117 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 OR1L4Q8NGR5 311 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 RND1Q92730 232 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 VCX2Q9H322 139 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 GNG12Q9UBI6 72 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 SDK1Q7Z5N4 2213 aa6.9□□□□□ -1.31
LSM5-208ENST00000450169 WI2-2373I1.2A0A1W2PRP0 233 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 D6R8Y8 96 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 DUX1O43812 170 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 PLP2Q04941 152 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 TAL2Q16559 108 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 ABHD17BQ5VST6 288 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 RPS19BP1Q86WX3 136 aaKnown RBP6.89□□□□□ -1.31
LSM5-208ENST00000450169 HHLA3Q9XRX5 114 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 CACNA1DQ01668 2161 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 WDFY4Q6ZS81 3184 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 FABP5P3A8MUU1 101 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 GRPP07492 148 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 MRPS21P82921 87 aaKnown RBP6.89□□□□□ -1.31
LSM5-208ENST00000450169 PAX8Q06710 450 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 CD69Q07108 199 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 ZNF766Q5HY98 468 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 MOGAT3Q86VF5 341 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.89□□□□□ -1.31
LSM5-208ENST00000450169 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 IFI27L2Q9H2X8 130 aa6.89□□□□□ -1.31
LSM5-208ENST00000450169 C15orf65H3BRN8 121 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 WNT9BO14905 357 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 PLAUP00749 431 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 TFF1P04155 84 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 TCRAP04437 139 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 CELA2AP08217 269 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 MPV17P39210 176 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 FOXG1P55316 489 aaPredicted RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 PRCDQ00LT1 54 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 C2orf83Q53S99 150 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 KLF17Q5JT82 389 aaPredicted RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 PATE2Q6UY27 113 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 WFDC3Q8IUB2 231 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 RITA1Q96K30 269 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 DCTN5Q9BTE1 182 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 MRPS17Q9Y2R5 130 aaKnown RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 TANC2Q9HCD6 1990 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 CFAP54Q96N23 3096 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 A0A1W2PPC4 97 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 FSTL3O95633 263 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 HLA-DRB4P13762 266 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 SRD5A1P18405 259 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 ATP5IP56385 69 aaPredicted RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 DIAPH2-AS1Q14236 149 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 ANXA2RQ3ZCQ2 193 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 LINC00305Q7Z4B0 112 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 Q86TA4 180 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 CIARTQ8N365 385 aaPredicted RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 SRSF12Q8WXF0 261 aaKnown RBP6.88□□□□□ -1.31
LSM5-208ENST00000450169 HIST1H4GQ99525 98 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 CITED1Q99966 193 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 TMEM133Q9H2Q1 129 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 HLA-DRB4X5D2U9 266 aa6.88□□□□□ -1.31
LSM5-208ENST00000450169 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 RHODO00212 210 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 IGHV3-13P01766 116 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 IGKCP01834 107 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 EVI2AP22794 236 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 MEOX1P50221 254 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
LSM5-208ENST00000450169 HOXA4Q00056 320 aaPredicted RBP6.87□□□□□ -1.31
LSM5-208ENST00000450169 GTSCR1Q86UQ5 136 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 ORMDL3Q8N138 153 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 Q8N1Y9 231 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 OR1L8Q8NGR8 309 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 CARD19Q96LW7 228 aa6.87□□□□□ -1.31
LSM5-208ENST00000450169 TPPP3Q9BW30 176 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms