RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MPDZO75970 2070 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 TRBV20-1A0A075B6N2 111 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 A0A096LNJ9 63 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 IGHV4-28A0A0C4DH34 117 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 LINC01546A6NGU7 62 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 TIMM8AO60220 97 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 SNCGO76070 127 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 P0C879 139 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 P0DMU3 169 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 FAM231AP0DMU4 169 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 FAM231CP0DMU5 169 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 HLA-DOBP13765 273 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 BCL3P20749 454 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 COL8A2P25067 703 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 PSMB8P28062 276 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 NCBP2P52298 156 aaKnown RBP eCLIP2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 C12orf74Q32Q52 190 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 SP6Q3SY56 376 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 C10orf25Q5T742 122 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 PCSK4Q6UW60 755 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 HSD11B1LQ7Z5J1 315 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 HMGN2P46Q86SG4 172 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 MARCH3Q86UD3 253 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 SLC25A45Q8N413 288 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 SUMF1Q8NBK3 374 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZNF740Q8NDX6 193 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 DLX4Q92988 240 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 RAB37Q96AX2 223 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 PLEKHB2Q96CS7 222 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 DPH3Q96FX2 82 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 CYYR1Q96J86 154 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 C2orf48Q96LS8 159 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 CHAC1Q9BUX1 264 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 TMEM147Q9BVK8 224 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 NPCDR1Q9BY65 106 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 SLC25A22Q9H936 323 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 STARD5Q9NSY2 213 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 B9D1Q9UPM9 204 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 TP53TG1Q9Y2A0 90 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 EML6Q6ZMW3 1958 aa2.85□□□□□ -1.95
HMGB3P8-201ENST00000449709 CACNA1IQ9P0X4 2223 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 TEX50A0A1B0GTY4 177 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 SYNGR2O43760 224 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 LMX1BO60663 402 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 MPDU1O75352 247 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 P04436 131 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 CISD3P0C7P0 127 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 UBE2D1P51668 147 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 PLGLB1Q02325 96 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 SRYQ05066 204 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 PRDX1Q06830 199 aaKnown RBP2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 SLC38A11Q08AI6 406 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 ARFRP1Q13795 201 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 RTL8BQ17RB0 113 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 RSPO1Q2MKA7 263 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 ABCA11PQ4W5N1 156 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 Q6ZQT7 251 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 Q6ZT83 130 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 PRIMA1Q86XR5 153 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 C11orf53Q8IXP5 236 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 SSMEM1Q8WWF3 244 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 PLA2G2FQ9BZM2 168 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 PRSS22Q9GZN4 317 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 ZNF331Q9NQX6 463 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 C11orf21Q9P2W6 132 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 FZR1Q9UM11 496 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 WDR83OSQ9Y284 106 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 V9GYY9 64 aa2.84□□□□□ -1.95
HMGB3P8-201ENST00000449709 COL5A1P20908 1838 aaPredicted RBP2.84□□□□□ -1.96
HMGB3P8-201ENST00000449709 FREM3P0C091 2139 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SHANK1Q9Y566 2161 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 MUC22E2RYF6 1773 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 TRBV25-1A0A075B6N4 114 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 TMED7-TICAM2A0A0A6YYA0 188 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 IGKV1-9A0A0C4DH69 117 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 A0A0D9SEW6 157 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 A0A0G2JRQ6 117 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 C19orf71A6NCJ1 209 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SRRM4A7MD48 611 aaKnown RBP2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 A8MWL6 223 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 K7EM74 188 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 K7ERJ3 54 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 RENP00797 406 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 APOHP02749 345 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 COX7CP15954 63 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 EMP1P54849 157 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 ODF3L2Q3SX64 289 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 FKBP1CQ5VVH2 108 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SLC25A48Q6ZT89 311 aaKnown RBP2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 Q71RC1 249 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 SSX8Q7RTT4 187 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 PCP2Q8IVA1 136 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 CIARTQ8N365 385 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 RPRMLQ8N4K4 120 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 C15orf53Q8NAA6 179 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 MDS2Q8NDY4 140 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 OR4C13Q8NGP0 309 aa2.83□□□□□ -1.96
HMGB3P8-201ENST00000449709 MPLKIPQ8TAP9 179 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms