RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 ZNF331Q9NQX6 463 aaPredicted RBP6.58□□□□□ -1.36
HCG18-238ENST00000449544 TRGV11A0A075B6L2 103 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 C7orf66A4D0T2 115 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 ISLRO14498 428 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 MBPP02686 304 aaPredicted RBP6.58□□□□□ -1.36
HCG18-238ENST00000449544 IGF1P05019 195 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 RHEBQ15382 184 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 SAPCD1Q5SSQ6 148 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 TMEM190Q8WZ59 177 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 GGACTQ9BVM4 153 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 MRPL32Q9BYC8 188 aaKnown RBP6.58□□□□□ -1.36
HCG18-238ENST00000449544 NDUFA6P56556 154 aa6.58□□□□□ -1.36
HCG18-238ENST00000449544 MORN3Q6PF18 240 aaPredicted RBP6.58□□□□□ -1.36
HCG18-238ENST00000449544 NKX6-2Q9C056 277 aaPredicted RBP6.58□□□□□ -1.36
HCG18-238ENST00000449544 PMS2P5A8MQ11 134 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 CGB3P0DN86 165 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 QRFPP83859 136 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 RITA1Q96K30 269 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 DMXL2Q8TDJ6 3036 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 A0A1B0GW64 132 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 UBE2CO00762 179 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 FCER1GP30273 86 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 TMEM183BQ1AE95 376 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 Q6ZS46 218 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 GPHB5Q86YW7 130 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 BAP18Q8IXM2 172 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 TMEM183AQ8IXX5 376 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 GFI1Q99684 422 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 NDUFA4L2Q9NRX3 87 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 LOC102723971A0A1B0GUV8 181 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 IGSF23A1L1A6 192 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 ZNF727A8MUV8 499 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 P01737 135 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 RNASE2P10153 161 aaKnown RBP6.57□□□□□ -1.36
HCG18-238ENST00000449544 MLANAQ16655 118 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 TMEM41BQ5BJD5 291 aa6.57□□□□□ -1.36
HCG18-238ENST00000449544 C1orf147Q96MC9 270 aaPredicted RBP6.57□□□□□ -1.36
HCG18-238ENST00000449544 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 M0R381 172 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 GAGE7O76087 117 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 TOMM40O96008 361 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 GAGE12FP0CL80 117 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 GAGE12GP0CL81 117 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 GAGE12IP0CL82 117 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 TAGLN2P37802 199 aaKnown RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 ASIPP42127 132 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 SULT1A2P50226 295 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 PAX9P55771 341 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 RUNX1Q01196 453 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 SLC51BQ86UW2 128 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 OR2K2Q8NGT1 345 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 ITPR1Q14643 2758 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 TRAV8-6A0A0B4J262 113 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 TMEM189A5PLL7 270 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 ZNF705GA8MUZ8 300 aaPredicted RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 SUPT4H1P63272 117 aaKnown RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 ZNF439Q8NDP4 499 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 SCRT1Q9BWW7 348 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 GATCO43716 136 aaKnown RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 NDUFA3O95167 84 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 PRB4P10163 310 aaPredicted RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 YPEL3P61236 119 aaPredicted RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 ZNF90Q03938 601 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 ALKAL2Q6UX46 152 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 OR2D3Q8NGH3 330 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 CITED4Q96RK1 184 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 TRGV9Q99603 122 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 AGMATQ9BSE5 352 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 F8W735 103 aaPredicted RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 RAB5CP51148 216 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 CADM3Q8N126 398 aa6.56□□□□□ -1.36
HCG18-238ENST00000449544 NXF2Q9GZY0 626 aaKnown RBP6.56□□□□□ -1.36
HCG18-238ENST00000449544 CPAMD8Q8IZJ3 1885 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 TRAV21A0A0B4J279 112 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 CTXND1A0A1B0GTU2 59 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 PSG3Q16557 428 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 ZNF880Q6PDB4 577 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 TNFRSF18Q9Y5U5 241 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 IGKV1-5P01602 117 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 MS4A6AQ9H2W1 248 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 GCGP01275 180 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 CHCHD5Q9BSY4 110 aa6.55□□□□□ -1.36
HCG18-238ENST00000449544 H7C1H1 209 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 FRMD6-AS1P0C7T7 363 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 SEC11BP0C7V7 166 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 SERF2P84101 59 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 TOR2AQ5JU69 321 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 SPATA31B1PQ5VZV4 182 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 ASB13Q8WXK3 278 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 RTBDNQ9BSG5 229 aaPredicted RBP6.54□□□□□ -1.36
HCG18-238ENST00000449544 RNASEKQ6P5S7 137 aaKnown RBP6.54□□□□□ -1.36
HCG18-238ENST00000449544 RAI1Q7Z5J4 1906 aaPredicted RBP6.54□□□□□ -1.36
HCG18-238ENST00000449544 ATP6V0BQ99437 205 aa6.54□□□□□ -1.36
HCG18-238ENST00000449544 IGHV4-30-4P0DP06 118 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms