RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SH2D1AO60880 128 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 C5orf24Q7Z6I8 188 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 PRSS33Q8NF86 280 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 FAM110DQ8TAY7 271 aaPredicted RBP8.28□□□□□ -1.08
SCN10A-201ENST00000449082 PI4KAP42356 2102 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 IGHV3-53P01767 116 aa8.28□□□□□ -1.08
SCN10A-201ENST00000449082 LINC01619G3V211 115 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 LINC00158P58513 81 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 LYZL1Q6UWQ5 148 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 PIP4P1Q86T03 277 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 MAPK1IP1LQ8NDC0 245 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 OR5A1Q8NGJ0 315 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 HEATR1Q9H583 2144 aaKnown RBP8.27□□□□□ -1.09
SCN10A-201ENST00000449082 TRAV2A0A0B4J234 112 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 LINC00587B1AMM8 73 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 SLC25A2Q9BXI2 301 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 SMPXQ9UHP9 88 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 A0A1B0GWB2 263 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 IGKV1-16P04430 117 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 ACACAQ13085 2346 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 CR1LQ2VPA4 569 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 RASL11AQ6T310 242 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 TMEM242Q9NWH2 141 aa8.27□□□□□ -1.09
SCN10A-201ENST00000449082 C15orf62A8K5M9 175 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 ATP6V0E1O15342 81 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 S100A7L2Q5SY68 101 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 PROK2Q9HC23 129 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 VCYO14598 125 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 LINC00205P59089 165 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 MYO7BQ6PIF6 2116 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 A0A1B0GW64 132 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 AMBPP02760 352 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 RIPPLY3P57055 190 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 PAX2Q02962 417 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 RPP25LQ8N5L8 163 aaKnown RBP8.26□□□□□ -1.09
SCN10A-201ENST00000449082 Q8TAT8 98 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 ZNF581Q9P0T4 197 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 LMO1P25800 156 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 CFHR2P36980 270 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 TDGF1P3P51864 188 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 DEFB131AP59861 70 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 TMEM249Q2WGJ8 235 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 NCOR1P1Q9H4R4 102 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 SEC11AP67812 179 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 CLDN16Q9Y5I7 305 aa8.26□□□□□ -1.09
SCN10A-201ENST00000449082 D6R8Y8 96 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 CYTL1Q9NRR1 136 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 TEX43Q6ZNM6 134 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 SHANK2-AS3Q9BTD1 123 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 LY96Q9Y6Y9 160 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 FOXL1Q12952 345 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 ATRAIDQ6UW56 229 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 SPCS1Q9Y6A9 102 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 PDE6HQ13956 83 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 CD300EQ496F6 205 aaPredicted RBP8.25□□□□□ -1.09
SCN10A-201ENST00000449082 IGFL4Q6B9Z1 124 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 PHLDA1Q8WV24 401 aaPredicted RBP8.25□□□□□ -1.09
SCN10A-201ENST00000449082 TRAV9-2A0A087WT02 112 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 NDUFB8O95169 186 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 NCR2O95944 276 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 ERCC8Q13216 396 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 C5orf30Q96GV9 206 aa8.25□□□□□ -1.09
SCN10A-201ENST00000449082 C11orf68Q9H3H3 251 aaKnown RBP8.25□□□□□ -1.09
SCN10A-201ENST00000449082 SPTBN2O15020 2390 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 IGHV3-64A0A075B6Q5 118 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 TYMSP04818 313 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 RASL10AQ92737 203 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 FHL1Q13642 323 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 HOXA3O43365 443 aaPredicted RBP8.24□□□□□ -1.09
SCN10A-201ENST00000449082 ZNF833PQ6ZTB9 187 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 AKAP6Q13023 2319 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 IGHV4-39P01824 125 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 LINC01551Q86U37 167 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 PLEKHB2Q96CS7 222 aa8.24□□□□□ -1.09
SCN10A-201ENST00000449082 LSM4Q9Y4Z0 139 aaKnown RBP8.24□□□□□ -1.09
SCN10A-201ENST00000449082 MCRIP2Q9BUT9 160 aaKnown RBP8.23□□□□□ -1.09
SCN10A-201ENST00000449082 CST9LQ9H4G1 147 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 NHP2Q9NX24 153 aaKnown RBP8.23□□□□□ -1.09
SCN10A-201ENST00000449082 FER1L5A0AVI2 2057 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 DEFB130BP0DP73 79 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 DEFB130AP0DP74 79 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 TEX36Q5VZQ5 186 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 Q6ZR03 302 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 MED12Q93074 2177 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 JPT2Q9H910 190 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 CACNA1BQ00975 2339 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 YPEL3P61236 119 aaPredicted RBP8.23□□□□□ -1.09
SCN10A-201ENST00000449082 C14orf178Q8N769 122 aaPredicted RBP8.23□□□□□ -1.09
SCN10A-201ENST00000449082 IGLV1-44P01699 117 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 ZNRD1Q9P1U0 126 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 COL6A6A6NMZ7 2263 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 TRBV24-1A0A075B6N3 115 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 TMEM238C9JI98 176 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 MLANAQ16655 118 aa8.23□□□□□ -1.09
SCN10A-201ENST00000449082 OR2K2Q8NGT1 345 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms