RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 A0A1W2PPQ1 181 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAGE12BA1L429 117 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF98A6NK75 572 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 C17orf98A8MV24 154 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 UPK2O00526 184 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAGE7O76087 117 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAGE12FP0CL80 117 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAGE12GP0CL81 117 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAGE12IP0CL82 117 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 C11orf71Q6IPW1 123 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 RXFP4Q8TDU9 374 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PCNX3Q9H6A9 2034 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 IGKV1-9A0A0C4DH69 117 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 FOXI3A8MTJ6 420 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 G3V318 75 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 SFT2D2O95562 160 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 PSMB6P28072 239 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 SLAQ13239 276 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 MUC7Q8TAX7 377 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 C5orf30Q96GV9 206 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 TM2D1Q9BX74 207 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 PPP1R17O96001 155 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 LGALS1P09382 135 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 GPHB5Q86YW7 130 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 PHYHIPLQ96FC7 376 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 H7C1H1 209 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 CD37P11049 281 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 SPNP16150 400 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 JUNBP17275 347 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 PAX9P55771 341 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 C7orf33Q8WU49 177 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 GPR82Q96P67 336 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 KIAA1549Q9HCM3 1950 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF561-AS1K7EIQ3 104 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 UBE2CO00762 179 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 CRISP2P16562 243 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 RPL12P30050 165 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 H1FOOQ8IZA3 346 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 OR11H6Q8NGC7 330 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 RHPN1-AS1Q9BWJ2 59 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 NHLH2Q02577 135 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF114Q8NC26 417 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 COQ2Q96H96 371 aa4.5□□□□□ -1.69
CDC42BPA-209ENST00000448940 H3BUA1 57 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 HLA-DQA1P01909 254 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 POLR2GP62487 172 aaKnown RBP eCLIP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SPCS2Q15005 226 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM183BQ1AE95 376 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 FOXB2Q5VYV0 432 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 WIPF2Q8TF74 440 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SFT2D1Q8WV19 159 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM167BQ9NRX6 74 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 UBE2D1P51668 147 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 EFNB2P52799 333 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 LCN15Q6UWW0 184 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SELENOHQ8IZQ5 122 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF48Q96MX3 618 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SEC22CQ9BRL7 303 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 ESM1Q9NQ30 184 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 CYSLTR1Q9Y271 337 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 A0A0C4DFX4 3053 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF737O75373 536 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 HLA-DRB1P01911 266 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SFTA2Q6UW10 78 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 NRARPQ7Z6K4 114 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TAF15Q92804 592 aaKnown RBP eCLIP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRBV6-7A0A0A0MS04 114 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 Q6ZSV7 163 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TOLLIPQ9H0E2 274 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 SPANXA1Q9NS26 97 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 PLA2G2EQ9NZK7 142 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 IGKV1-12A0A0C4DH73 117 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 C15orf61A6NNL5 157 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 H0YJW9 148 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRGC2P03986 189 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 JOSD1Q15040 202 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 C22orf34Q6ZV56 151 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 LINC00311Q8N616 119 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 LINC01006Q8NI28 216 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 MED9Q9NWA0 146 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 MRPL27Q9P0M9 148 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 TGIF2-C20orf24A0A0A6YYL0 155 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 A8MWL6 223 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 P2RY1P47900 373 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 PKIAP61925 76 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 HMGN3Q15651 99 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 PVRIGQ6DKI7 326 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 DEFB125Q8N687 156 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF485Q8NCK3 441 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 GPR146Q96CH1 333 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 PRO1933Q9H354 126 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 CHD6Q8TD26 2715 aa4.49□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM90A26D6RGX4 464 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 CT83Q5H943 113 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 MUC21Q5SSG8 566 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF841Q6ZN19 808 aa4.48□□□□□ -1.69
CDC42BPA-209ENST00000448940 C1orf229Q6ZS94 237 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms