RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OCC1Q8TAD7 63 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 BLNKQ8WV28 456 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 SFRP2Q96HF1 295 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 JMJD8Q96S16 334 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 OTORQ9NRC9 128 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 RABAC1Q9UI14 185 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 URGCP-MRPS24S4R325 110 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 S4R3C0 116 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 TACC2O95359 2948 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 PGPA6NDG6 321 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF98A6NK75 572 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 LINC01548A6NM66 108 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 FSHBP01225 129 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 SLC25A5P05141 298 aaKnown RBP8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 RPS10P46783 165 aaKnown RBP8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 RELQ04864 619 aaPredicted RBP8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 CENPWQ5EE01 88 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 OR10G8Q8NGN5 311 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 SMIM12Q96EX1 92 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 FAM210BQ96KR6 192 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 EPDR1Q9UM22 224 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 CR1P17927 2039 aa8.24□□□□□ -1.09
VIPAS39-203ENST00000448935 SPG11Q96JI7 2443 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 SH2D7A6NKC9 451 aaPredicted RBP8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 IGHV3-23P01764 117 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 PFN1P07737 140 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 RPL7P18124 248 aaKnown RBP8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 GPR183P32249 361 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 UBE2G1P62253 170 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 PDE6HQ13956 83 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 USF2Q15853 346 aaPredicted RBP8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 TEX38Q6PEX7 206 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 USMG5Q96IX5 58 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 ATG101Q9BSB4 218 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 Q9H3A6 140 aa8.23□□□□□ -1.09
VIPAS39-203ENST00000448935 TRGV3P03979 118 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 CLEC3BP05452 202 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 IER3P46695 156 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 TMEM183BQ1AE95 376 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 MAPK1IP1LQ8NDC0 245 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 MS4A10Q96PG2 267 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 PYGO2Q9BRQ0 406 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 BIN3Q9NQY0 253 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF586Q9NXT0 402 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 LRRK2Q5S007 2527 aa8.22□□□□□ -1.09
VIPAS39-203ENST00000448935 TRBV19A0A075B6N1 114 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 TRAV9-1A0A075B6T8 112 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 TGIF2-C20orf24A0A0A6YYL0 155 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 A0A0G2JLM5 398 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 PGPEP1LA6NFU8 196 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 GCGP01275 180 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 CXCL1P09341 107 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 IGLC2P0DOY2 106 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 RPL19P84098 196 aaKnown RBP8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 FOXL1Q12952 345 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 FAM209BQ5JX69 171 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 CLEC19AQ6UXS0 136 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 FMC1Q96HJ9 113 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 IGF2BP2-AS1Q96M15 143 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 GPR82Q96P67 336 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 CHRDL1Q9BU40 450 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 OSTCQ9NRP0 149 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 KLF12Q9Y4X4 402 aa8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 SOX21Q9Y651 276 aaPredicted RBP8.21□□□□□ -1.09
VIPAS39-203ENST00000448935 PRRC2AP48634 2157 aaKnown RBP8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 PPP5D1E7EU14 171 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 K7EQM0 130 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 ISLRO14498 428 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 GGCTO75223 188 aaKnown RBP8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 S100A6P06703 90 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 TPPP2P59282 170 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 ERVFC1-1P60608 527 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 PSG9Q00887 426 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 Q6YL49 198 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 BAGE2Q86Y30 109 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 KRTAP1-3Q8IUG1 177 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 ARL6IP6Q8N6S5 226 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 AAMDCQ9H7C9 122 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 SRD5A3Q9H8P0 318 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 GNB4Q9HAV0 340 aa8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 AURKAIP1Q9NWT8 199 aaPredicted RBP8.21□□□□□ -1.1
VIPAS39-203ENST00000448935 PTPN13Q12923 2485 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 TMEM89A2RUT3 159 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 K7EN84 100 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 ZNF253O75346 499 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 IGHV4-59P01825 116 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 TCRAP04437 139 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 HNF1AP20823 631 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 BLCAPP62952 87 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 TOMM20LQ6UXN7 152 aa8.2□□□□□ -1.1
VIPAS39-203ENST00000448935 OR8I2Q8N0Y5 310 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms