RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 RPP30P78346 268 aaKnown RBP10.96□□□□□ -0.65
TRA2A-203ENST00000448549 SPINK13Q1W4C9 94 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 RNF182Q8N6D2 247 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 BPIFCQ8NFQ6 507 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 OR11H7Q8NGC8 314 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 OR4D5Q8NGN0 318 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 OR1B1Q8NGR6 318 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 CIB3Q96Q77 187 aaPredicted RBP10.96□□□□□ -0.65
TRA2A-203ENST00000448549 TMEM147Q9BVK8 224 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 TMED3Q9Y3Q3 217 aa10.96□□□□□ -0.65
TRA2A-203ENST00000448549 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.66
TRA2A-203ENST00000448549 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
TRA2A-203ENST00000448549 INSP01308 110 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 FAUP35544 74 aaKnown RBP10.95□□□□□ -0.66
TRA2A-203ENST00000448549 AKR1C1Q04828 323 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 FGL1Q08830 312 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 SPANXN5Q5MJ07 72 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 GPR82Q96P67 336 aa10.95□□□□□ -0.66
TRA2A-203ENST00000448549 H3BP45 60 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 HOXB5P09067 269 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 PPP1R1AQ13522 171 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 BAP18Q8IXM2 172 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 TRIM63Q969Q1 353 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 BCL7BQ9BQE9 202 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 ATG101Q9BSB4 218 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 RYR1P21817 5038 aa10.94□□□□□ -0.66
TRA2A-203ENST00000448549 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 LYRM9A8MSI8 78 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 SFT2D2O95562 160 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 AZU1P20160 251 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 FAM3BP58499 235 aaPredicted RBP10.93□□□□□ -0.66
TRA2A-203ENST00000448549 AP3S2P59780 193 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 FCN2Q15485 313 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 PYDC2Q56P42 97 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 ACOT7LQ6ZUV0 252 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 TOMM5Q8N4H5 51 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 KRTAP4-5Q9BYR2 181 aa10.93□□□□□ -0.66
TRA2A-203ENST00000448549 SLC25A39Q9BZJ4 359 aaPredicted RBP10.93□□□□□ -0.66
TRA2A-203ENST00000448549 STRAPQ9Y3F4 350 aaKnown RBP10.93□□□□□ -0.66
TRA2A-203ENST00000448549 F5H768 121 aa10.92□□□□□ -0.66
TRA2A-203ENST00000448549 H3BMQ9 156 aa10.92□□□□□ -0.66
TRA2A-203ENST00000448549 S100A7P31151 101 aa10.92□□□□□ -0.66
TRA2A-203ENST00000448549 ZNF738Q8NE65 137 aa10.92□□□□□ -0.66
TRA2A-203ENST00000448549 SLC25A21Q9BQT8 299 aaPredicted RBP10.92□□□□□ -0.66
TRA2A-203ENST00000448549 SHANK2-AS3Q9BTD1 123 aa10.92□□□□□ -0.66
TRA2A-203ENST00000448549 PLAC8L1A1L4L8 177 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 SMCO3A2RU48 225 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 H3BRN7 92 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 NUDT3O95989 172 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 IL5P05113 134 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
TRA2A-203ENST00000448549 TSPOP30536 169 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 B2MP61769 119 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 CYP2G1PQ6ZSU1 146 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 TMEM144Q7Z5S9 345 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 LINC01587Q99440 93 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 HIGD1AQ9Y241 93 aa10.91□□□□□ -0.66
TRA2A-203ENST00000448549 BOLA2-SMG1P6H3BVE0 249 aa10.9□□□□□ -0.66
TRA2A-203ENST00000448549 NOL3O60936 208 aaKnown RBP10.9□□□□□ -0.66
TRA2A-203ENST00000448549 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
TRA2A-203ENST00000448549 RAP2BP61225 183 aa10.9□□□□□ -0.66
TRA2A-203ENST00000448549 RHOBP62745 196 aa10.9□□□□□ -0.66
TRA2A-203ENST00000448549 HIST1H1AQ02539 215 aaPredicted RBP10.9□□□□□ -0.66
TRA2A-203ENST00000448549 TNP2Q05952 138 aa10.9□□□□□ -0.66
TRA2A-203ENST00000448549 UHRF2Q96PU4 802 aa10.9□□□□□ -0.66
TRA2A-203ENST00000448549 V9GYH0 126 aa10.9□□□□□ -0.66
TRA2A-203ENST00000448549 ABCA13Q86UQ4 5058 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 NBDYA0A0U1RRE5 68 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 HYPMO75409 117 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 ADAP1O75689 374 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 OR5G3P0C626 314 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 HTN1P15515 57 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 CXCL3P19876 107 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 POLR2GP62487 172 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRA2A-203ENST00000448549 ID3Q02535 119 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 OR8A1Q8NGG7 326 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 ZNRF2Q8NHG8 242 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 PPP1R14DQ9NXH3 145 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
TRA2A-203ENST00000448549 CBY3A6NI87 242 aa10.88□□□□□ -0.67
TRA2A-203ENST00000448549 ATP5G1P05496 136 aa10.88□□□□□ -0.67
TRA2A-203ENST00000448549 LINC00869P0C866 280 aa10.88□□□□□ -0.67
TRA2A-203ENST00000448549 ATP5G3P48201 142 aa10.88□□□□□ -0.67
TRA2A-203ENST00000448549 TAS2R60P59551 318 aa10.88□□□□□ -0.67
TRA2A-203ENST00000448549 LRRC20Q8TCA0 184 aa10.88□□□□□ -0.67
TRA2A-203ENST00000448549 PMS2P5A8MQ11 134 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 C16orf90A8MZG2 172 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 CCL18P55774 89 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 PLP1P60201 277 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 RRAS2P62070 204 aaPredicted RBP10.87□□□□□ -0.67
TRA2A-203ENST00000448549 PSG3Q16557 428 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 C6orf223Q8N319 242 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
TRA2A-203ENST00000448549 A0A087X0K7 114 aa10.86□□□□□ -0.67
TRA2A-203ENST00000448549 C9orf170A2RU37 121 aa10.86□□□□□ -0.67
TRA2A-203ENST00000448549 SSSCA1O60232 199 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms