RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SYT8Q8NBV8 401 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 TMEM190Q8WZ59 177 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 FXYD5Q96DB9 178 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 NBEAQ8NFP9 2946 aa15.42■□□□□ 0.06
HMGA1-205ENST00000447654 PRR14LQ5THK1 2151 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 PROP1O75360 226 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 HBDP02042 147 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 ZNF766Q5HY98 468 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 FAM53AQ6NSI3 398 aaPredicted RBP15.41■□□□□ 0.06
HMGA1-205ENST00000447654 WDR86Q86TI4 376 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 C20orf78Q9BR46 151 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 NHP2Q9NX24 153 aaKnown RBP15.41■□□□□ 0.06
HMGA1-205ENST00000447654 PRNDQ9UKY0 176 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 C3orf80F5H4A9 247 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 POU2AF1Q16633 256 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 ITLN1Q8WWA0 313 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 RITA1Q96K30 269 aa15.41■□□□□ 0.06
HMGA1-205ENST00000447654 MOSP00540 346 aa15.4■□□□□ 0.06
HMGA1-205ENST00000447654 LINC01559Q495D7 138 aa15.4■□□□□ 0.06
HMGA1-205ENST00000447654 OR1L8Q8NGR8 309 aa15.4■□□□□ 0.06
HMGA1-205ENST00000447654 F11RQ9Y624 299 aaKnown RBP15.4■□□□□ 0.06
HMGA1-205ENST00000447654 BSNQ9UPA5 3926 aa15.4■□□□□ 0.06
HMGA1-205ENST00000447654 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 COX7A2P2O60397 106 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 SLC25A5P05141 298 aaKnown RBP15.39■□□□□ 0.05
HMGA1-205ENST00000447654 LINC00322Q6ZN03 302 aaPredicted RBP15.39■□□□□ 0.05
HMGA1-205ENST00000447654 PDPNQ86YL7 162 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 VKORC1L1Q8N0U8 176 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 DDB2Q92466 427 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 IFI27L1Q96BM0 104 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 ATMQ13315 3056 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 TRAV5A0A0B4J249 113 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 GATA3P23771 443 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 C10orf113Q5VZT2 155 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 Q6AWC8 147 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 RND1Q92730 232 aa15.39■□□□□ 0.05
HMGA1-205ENST00000447654 RALYQ9UKM9 306 aaKnown RBP15.39■□□□□ 0.05
HMGA1-205ENST00000447654 K7ERJ3 54 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 KLK10O43240 276 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 PRCDQ00LT1 54 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 RRN3P1Q2M238 152 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 U3KQK5 164 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 TRGV5A0A0B4J1U4 118 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 C15orf65H3BRN8 121 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 MT-ATP8P03928 68 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 INSL3P51460 131 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 CD69Q07108 199 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 ZNF493Q6ZR52 646 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 FDCSPQ8NFU4 85 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 IFI27L2Q9H2X8 130 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 ZMAT4Q9H898 229 aa15.38■□□□□ 0.05
HMGA1-205ENST00000447654 SVILO95425 2214 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 PYYP10082 97 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 CCL11P51671 97 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 TM4SF20Q53R12 229 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 MORN5Q5VZ52 161 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 TMEM133Q9H2Q1 129 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 DMXL2Q8TDJ6 3036 aa15.37■□□□□ 0.05
HMGA1-205ENST00000447654 OVOL3O00110 214 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 HERV-K104P63124 156 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 C12orf74Q32Q52 190 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 FAM90A1Q86YD7 464 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 CEP250Q9BV73 2442 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 COL8A1P27658 744 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 IFI27P40305 119 aaPredicted RBP15.36■□□□□ 0.05
HMGA1-205ENST00000447654 GNG5P63218 68 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 PAX8Q06710 450 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 PRR31Q5SQ13 230 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 ZFAND6Q6FIF0 208 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 OR13A1Q8NGR1 328 aa15.36■□□□□ 0.05
HMGA1-205ENST00000447654 TRBV25-1A0A075B6N4 114 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 IGHV3-43A0A0B4J1X8 118 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 TRBV6-1A0A0K0K1D8 114 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 IGHV3-43DP0DP04 118 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 EVI2AP22794 236 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.35■□□□□ 0.05
HMGA1-205ENST00000447654 GVINP1Q7Z2Y8 2422 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 SMG1Q96Q15 3661 aaKnown RBP15.35■□□□□ 0.05
HMGA1-205ENST00000447654 SPTBN2O15020 2390 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 NPIPB5A8MRT5 1133 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 LINC01619G3V211 115 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 XGP55808 180 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 TNFRSF18Q9Y5U5 241 aa15.35■□□□□ 0.05
HMGA1-205ENST00000447654 DEFB108AA8MXU0 73 aa15.34■□□□□ 0.05
HMGA1-205ENST00000447654 FSTL3O95633 263 aa15.34■□□□□ 0.05
HMGA1-205ENST00000447654 PGPA6NDG6 321 aa15.34■□□□□ 0.05
HMGA1-205ENST00000447654 MPV17P39210 176 aa15.34■□□□□ 0.05
HMGA1-205ENST00000447654 CFAP126Q5VTH2 177 aa15.33■□□□□ 0.04
HMGA1-205ENST00000447654 MDP1Q86V88 176 aa15.33■□□□□ 0.04
HMGA1-205ENST00000447654 TMEM178AQ8NBL3 297 aa15.33■□□□□ 0.04
HMGA1-205ENST00000447654 PRELID3AQ96N28 172 aa15.33■□□□□ 0.04
HMGA1-205ENST00000447654 TMEM262E9PQX1 116 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 NDUFS7O75251 213 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 MOB3BQ86TA1 216 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 TEX29Q8N6K0 151 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 PPDPFLQ8WWR9 84 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 GNG12Q9UBI6 72 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 IGHG4P01861 327 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 TCRAP04437 139 aa15.32■□□□□ 0.04
HMGA1-205ENST00000447654 RNASE2P10153 161 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms