RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 IGHV1-8P0DP01 117 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 LGALS7P47929 136 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 ZNF138P52744 262 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 OR10J3Q5JRS4 329 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 BRD3OSQ6XYD6 125 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 C18orf32Q8TCD1 76 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 NPVFQ9HCQ7 196 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 YTHDF2Q9Y5A9 579 aaKnown RBP4.79□□□□□ -1.64
PROM1-201ENST00000447510 TEX48A0A1B0GUV7 120 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 F2RL2O00254 374 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 IGKV1-39P01597 117 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 IGKV1D-39P04432 117 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 CD1BP29016 333 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 MC5RP33032 325 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 TMEM30BQ3MIR4 351 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 SPATA31B1PQ5VZV4 182 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 TMEM136Q6ZRR5 245 aa4.79□□□□□ -1.64
PROM1-201ENST00000447510 TENM4Q6N022 2769 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 TNCP24821 2201 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 IGKV1-6A0A0C4DH72 117 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 A0A0G2JLM5 398 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 A6NDN8 102 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 PRTN3P24158 256 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 ERVK-16P61578 105 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 CCDC144NLQ6NUI1 221 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 CFAP161Q6P656 301 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.78□□□□□ -1.64
PROM1-201ENST00000447510 DPM3Q9P2X0 92 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 ARHGAP32A7KAX9 2087 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 IGHV3-72A0A0B4J1Y9 119 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 J3QR89 54 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 RRHO14718 337 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 RAMP3O60896 148 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 FSTL3O95633 263 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 CXorf1O96002 111 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 FABP2P12104 132 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 LINC00205P59089 165 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 RTL8BQ17RB0 113 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 VWC2Q2TAL6 325 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 TMEM97Q5BJF2 176 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 IL17RELQ6ZVW7 336 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 OR8A1Q8NGG7 326 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 FAM216AQ8WUB2 273 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 SRSF8Q9BRL6 282 aaKnown RBP4.78□□□□□ -1.64
PROM1-201ENST00000447510 ST20Q9HBF5 79 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 TIMM9Q9Y5J7 89 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 TRBV9A0A0B4J1U6 114 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 NCBP2LA6PVI3 153 aaKnown RBP4.78□□□□□ -1.64
PROM1-201ENST00000447510 CHEK1O14757 476 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 NMUP48645 174 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 HSD52Q0P140 79 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 TPPP3Q9BW30 176 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 MAP1LC3CQ9BXW4 147 aa4.78□□□□□ -1.64
PROM1-201ENST00000447510 BSNQ9UPA5 3926 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 NAV3Q8IVL0 2385 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 J3QLI3 93 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 FCGR3BO75015 233 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 IGHV4-31P0DP07 118 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 GCSHP23434 173 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 GCHFRP30047 84 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 FCER1GP30273 86 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 RHOBP62745 196 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 CX3CL1P78423 397 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
PROM1-201ENST00000447510 SPATA12Q7Z6I5 190 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 SS18L2Q9UHA2 77 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 MTORP42345 2549 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 VWC2LB2RUY7 222 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 J3QR06 171 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 OR5AL1P0C617 328 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 STAG3L3P0CL85 134 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 RAB31Q13636 194 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 KIR3DS1Q14943 382 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 LY6EQ16553 131 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 TMEM177Q53S58 311 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 CIARTQ8N365 385 aaPredicted RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 BLNKQ8WV28 456 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 V9GYV3 84 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 ITPR3Q14573 2671 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 PIGBOS1A0A0B4J2F0 54 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 H0YJW9 148 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 CNIH1O95406 144 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 SRD5A1P18405 259 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 C17orf58Q2M2W7 97 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 RUSC1-AS1Q66K80 236 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 FAM53AQ6NSI3 398 aaPredicted RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 TMEM14EPQ6UXP3 125 aa4.77□□□□□ -1.65
PROM1-201ENST00000447510 ZNF418Q8TF45 676 aaPredicted RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 ZNF48Q96MX3 618 aaPredicted RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 HSD17B10Q99714 261 aaKnown RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 GEMIN7Q9H840 131 aaKnown RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 MBNL3Q9NUK0 354 aaKnown RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 MRPL27Q9P0M9 148 aaKnown RBP4.77□□□□□ -1.65
PROM1-201ENST00000447510 SYS1-DBNDD2H3BUS1 97 aa4.76□□□□□ -1.65
PROM1-201ENST00000447510 NPFFO15130 113 aa4.76□□□□□ -1.65
PROM1-201ENST00000447510 RPL39P5Q59GN2 51 aa4.76□□□□□ -1.65
PROM1-201ENST00000447510 DRAM1Q8N682 238 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms