RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.21
KLHL3-202ENST00000447439 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.21
KLHL3-202ENST00000447439 M0R3E3 92 aa7.46□□□□□ -1.21
KLHL3-202ENST00000447439 NHLH1Q02575 133 aa7.46□□□□□ -1.21
KLHL3-202ENST00000447439 MUC21Q5SSG8 566 aa7.46□□□□□ -1.21
KLHL3-202ENST00000447439 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.21
KLHL3-202ENST00000447439 MLST8Q9BVC4 326 aa7.46□□□□□ -1.21
KLHL3-202ENST00000447439 H0Y8G0 127 aa7.46□□□□□ -1.22
KLHL3-202ENST00000447439 TOMM40O96008 361 aa7.46□□□□□ -1.22
KLHL3-202ENST00000447439 LTAP01374 205 aa7.46□□□□□ -1.22
KLHL3-202ENST00000447439 Q6ZVH6 145 aa7.46□□□□□ -1.22
KLHL3-202ENST00000447439 C5orf17Q8NAS9 161 aa7.46□□□□□ -1.22
KLHL3-202ENST00000447439 ANKHD1Q8IWZ3 2542 aaKnown RBP7.46□□□□□ -1.22
KLHL3-202ENST00000447439 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 FAM181BA6NEQ2 426 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 ZNF785A8K8V0 405 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 K7EIM0 57 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 CSN3P07498 182 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 CTRLP40313 264 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 IGFL4Q6B9Z1 124 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 Q86TA4 180 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 DAZAP1Q96EP5 407 aaKnown RBP7.45□□□□□ -1.22
KLHL3-202ENST00000447439 VKORC1Q9BQB6 163 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 KLF12Q9Y4X4 402 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 TMSB15BA0A087X1C1 80 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 K7ENP7 123 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 IGLV2-11P01706 119 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 IL4P05112 153 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 COL8A1P27658 744 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 FCGR2BP31994 310 aaPredicted RBP7.45□□□□□ -1.22
KLHL3-202ENST00000447439 RBPJQ06330 500 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 PVRIGQ6DKI7 326 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 Q6ZN92 141 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 DYNAPQ8N1N2 210 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 STXBP6Q8NFX7 210 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 WIPF2Q8TF74 440 aaPredicted RBP7.45□□□□□ -1.22
KLHL3-202ENST00000447439 OR8B2Q96RD0 313 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 C19orf71A6NCJ1 209 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 LY6LH3BQJ8 138 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 NDUFS7O75251 213 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 RPLP1P05386 114 aaKnown RBP7.45□□□□□ -1.22
KLHL3-202ENST00000447439 HBBP68871 147 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 OR8B3Q8NGG8 313 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 ZC2HC1AQ96GY0 325 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 FMC1Q96HJ9 113 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 TXN2Q99757 166 aa7.45□□□□□ -1.22
KLHL3-202ENST00000447439 COL6A6A6NMZ7 2263 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 COL12A1Q99715 3063 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 NCBP2LA6PVI3 153 aaKnown RBP7.44□□□□□ -1.22
KLHL3-202ENST00000447439 NPSP0C0P6 89 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 OR4B1Q8NGF8 309 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 PRSS22Q9GZN4 317 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 HTR1DP28221 377 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 NDPQ00604 133 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 RELQ04864 619 aaPredicted RBP7.44□□□□□ -1.22
KLHL3-202ENST00000447439 C8orf49Q96NF6 230 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 LPAR2Q9HBW0 351 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 RAXQ9Y2V3 346 aa7.44□□□□□ -1.22
KLHL3-202ENST00000447439 A8MWL6 223 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 LIPFP07098 398 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 IGLC2P0DOY2 106 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 IGLC3P0DOY3 106 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 TNFRSF14Q92956 283 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 TMEM208Q9BTX3 173 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 CHRDL1Q9BU40 450 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 MRPL27Q9P0M9 148 aaKnown RBP7.43□□□□□ -1.22
KLHL3-202ENST00000447439 CHEK1O14757 476 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 NBR2O15453 112 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 ARMS2P0C7Q2 107 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 CA7P43166 264 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 HINT1P49773 126 aaPredicted RBP7.43□□□□□ -1.22
KLHL3-202ENST00000447439 FAM120AOSQ5T036 256 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 STPG4Q8N801 248 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 ZNF491Q8N8L2 437 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 OTORQ9NRC9 128 aa7.43□□□□□ -1.22
KLHL3-202ENST00000447439 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 C2orf70A6NJV1 201 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 M0QZK8 103 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 OR2J3O76001 311 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 HLA-DRB1P01911 266 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 SFTPCP11686 197 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 CRIP1P50238 77 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 HNRNPA3P51991 378 aaKnown RBP7.42□□□□□ -1.22
KLHL3-202ENST00000447439 PLP1P60201 277 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 ADORA2A-AS1P86434 159 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 KLF5Q13887 457 aaPredicted RBP7.42□□□□□ -1.22
KLHL3-202ENST00000447439 CFHR4Q92496 578 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 RNF125Q96EQ8 232 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 DPM3Q9P2X0 92 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 hDV102S1A0JD36 115 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 IGLL1P15814 213 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 HLA-DMBP28068 263 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 PAX2Q02962 417 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 SIGLEC15Q6ZMC9 328 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms