RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 DYDC1Q8WWB3 177 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 TMEM70Q9BUB7 260 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 MAP1LC3BQ9GZQ8 125 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 CHST6Q9GZX3 395 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 AICDAQ9GZX7 198 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 NUP98P52948 1817 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 C2CD3Q4AC94 2353 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF407Q9C0G0 2248 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 RFX7Q2KHR2 1363 aa2.46□□□□□ -2.02
HMGB1P48-201ENST00000446155 CELSR3Q9NYQ7 3312 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 MYO7AQ13402 2215 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 LRBAP50851 2863 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 PSME4Q14997 1843 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 CENPEQ02224 2701 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 MYH3P11055 1940 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 FUOMA2VDF0 154 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 VPS37CA5D8V6 355 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 TMEM235A6NFC5 223 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 FABP5P3A8MUU1 101 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 J3QRK9 145 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 PSCAO43653 123 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 ORC5O43913 435 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 IFNA14P01570 189 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 TFPTP0C1Z6 253 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 CA5AP35218 305 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF80P51504 273 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 PIGPP57054 158 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 HIST1H4AP62805 103 aaKnown RBP2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 MEF2BQ02080 365 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF705AQ6ZN79 300 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF767PQ75MW2 155 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 DEFB128Q7Z7B8 93 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 MSRB3Q8IXL7 192 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR10D4PQ8NGN7 298 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 FGF13Q92913 245 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 LYSMD1Q96S90 227 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 HIGD2AQ9BW72 106 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR8D2Q9GZM6 311 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 AMMECR1Q9Y4X0 333 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 NAV3Q8IVL0 2385 aa2.45□□□□□ -2.02
HMGB1P48-201ENST00000446155 ITPR2Q14571 2701 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 TRAV38-1A0A0B4J264 116 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 TRAV41A0A0B4J266 112 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 A0A0J9YW62 118 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 TRAPPC2LH3BP13 241 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR2J2O76002 312 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 HRES1P13985 223 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 GZMHP20718 246 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 RPS4Y1P22090 263 aaKnown RBP2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 S100GP29377 79 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 CASP1P29466 404 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 ALDH3A1P30838 453 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 LY6EQ16553 131 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 SCGB2B2Q4G0G5 96 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 LYRM7Q5U5X0 104 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 LCA10Q71F78 164 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 C12orf29Q8N999 325 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR13D1Q8NGV5 346 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 GRPEL2Q8TAA5 225 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 DEDD2Q8WXF8 326 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 MALSU1Q96EH3 234 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 SERPINI1Q99574 410 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 PBOV1Q9GZY1 135 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 MARCOQ9UEW3 520 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 RBM7Q9Y580 266 aaKnown RBP2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 PLXNB2O15031 1838 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 LAMA1P25391 3075 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 DNHD1Q96M86 4753 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 MYH2Q9UKX2 1941 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZFHX3Q15911 3703 aa2.44□□□□□ -2.02
HMGB1P48-201ENST00000446155 UTP20O75691 2785 aaKnown RBP2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 IRGMA1A4Y4 181 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 BUB1B-PAK6H3BSN5 160 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 PFDN1O60925 122 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 BANF1O75531 89 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 IGHV3-7P01780 117 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF728P0DKX0 622 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF14P17017 642 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 RAB4BP61018 213 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 KRTAP13-2Q52LG2 175 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 SPANXN3Q5MJ09 141 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 OR5C1Q8NGR4 320 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 RSPO3Q9BXY4 272 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 RNF122Q9H9V4 155 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 TIMM22Q9Y584 194 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 MINOS1-NBL1R4GNA1 71 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 HSPE1-MOB4S4R3N1 261 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 PTPRQQ9UMZ3 2332 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 LRRK2Q5S007 2527 aa2.43□□□□□ -2.02
HMGB1P48-201ENST00000446155 KIF20BQ96Q89 1820 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 NBEAL1Q6ZS30 2694 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 SIPA1L3O60292 1781 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 A0A1W2PRE2 83 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 C11orf86A6NJI1 115 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 RIIAD1A6NNX1 92 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 ZNF73O43830 326 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 UCHL1P09936 223 aa2.42□□□□□ -2.02
HMGB1P48-201ENST00000446155 S100A4P26447 101 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms