RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 TMEM219Q86XT9 240 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 Q8N8P6 123 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 TRAV21A0A0B4J279 112 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 M0R1B8 84 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 MAGEA5P43359 124 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 TNFAIP6P98066 277 aaPredicted RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 CARD19Q96LW7 228 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 PRSS46E5RG02 174 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 CCL11P51671 97 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 PSG7Q13046 419 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 MTCL1Q9Y4B5 1905 aaKnown RBP4.2□□□□□ -1.74
SCN11A-202ENST00000444237 IGKV1-27A0A075B6S5 117 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 KNCNA6PVL3 124 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 F8VRH5 84 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 NPPCP23582 126 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 GUSBP11Q6P575 273 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 FAM214BQ7L5A3 538 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 DKK2Q9UBU2 259 aa4.2□□□□□ -1.74
SCN11A-202ENST00000444237 DOCK4Q8N1I0 1966 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 KLK10O43240 276 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 SRSF2Q01130 221 aaKnown RBP4.19□□□□□ -1.74
SCN11A-202ENST00000444237 SLC25A53Q5H9E4 307 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 TMEM105Q8N8V8 129 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 WDR81Q562E7 1941 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 LMO7DNF2Z398 122 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 LYZL6O75951 148 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 HLA-DRB4P13762 266 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 SLC25A16P16260 332 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 CFHR2P36980 270 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 TMEM42Q69YG0 159 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 LYPD1Q8N2G4 141 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 SCARF2Q96GP6 870 aaPredicted RBP4.19□□□□□ -1.74
SCN11A-202ENST00000444237 MRPL35Q9NZE8 188 aaKnown RBP4.19□□□□□ -1.74
SCN11A-202ENST00000444237 HLA-DRB4X5D2U9 266 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 TNRC6AQ8NDV7 1962 aaKnown RBP4.19□□□□□ -1.74
SCN11A-202ENST00000444237 A4D1N5 150 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 M0R381 172 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 GHRHP01286 108 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 CFC1P0CG37 223 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 CRYGSP22914 178 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 PVRIGQ6DKI7 326 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 Q6ZS92 163 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 ASCL5Q7RTU5 278 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 C3orf56Q8N813 242 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 A0A087WX48 190 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 CENPVL3A0A0U1RRI6 287 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 NDUFA7O95182 113 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 IGHV3-48P01763 117 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 RNASE1P07998 156 aaKnown RBP4.19□□□□□ -1.74
SCN11A-202ENST00000444237 APELAP0DMC3 54 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 NXPH1P58417 271 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
SCN11A-202ENST00000444237 PMS2CLQ68D20 193 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 Q6Q795 121 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 TMEM243Q9BU79 118 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 TP53TG3Q9ULZ0 132 aa4.19□□□□□ -1.74
SCN11A-202ENST00000444237 HERVK_113P63121 156 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 DEFB109BQ30KR1 87 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 C16orf92Q96LL3 132 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 C21orf140B9A014 251 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 CCDC179H3BU77 68 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 ATP5J2P56134 94 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 HES7Q9BYE0 225 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 PEMTQ9UBM1 199 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SIP14410 1827 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SH2D1AO60880 128 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SRD5A1P18405 259 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 CD24P25063 80 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 MRPL51Q4U2R6 128 aaKnown RBP4.18□□□□□ -1.74
SCN11A-202ENST00000444237 ACP7Q6ZNF0 438 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 MPDZO75970 2070 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 IGHV3OR15-7A0A075B7D8 119 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SMKR1H3BMG3 65 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 RHODO00212 210 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 CCL3P10147 92 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 CNTFRP26992 372 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SUMO2P61956 95 aaKnown RBP4.18□□□□□ -1.74
SCN11A-202ENST00000444237 ZNF826PQ6ZT77 177 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 TMEM75Q8N9X5 138 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 METTL26Q96S19 204 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 TRGV9Q99603 122 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SLC50A1Q9BRV3 221 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 C11orf1Q9H5F2 150 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 H3BT86 120 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 SOCS3O14543 225 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 LINC01620Q4KN68 170 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 PEAR1Q5VY43 1037 aaPredicted RBP4.18□□□□□ -1.74
SCN11A-202ENST00000444237 NEU4Q8WWR8 484 aaPredicted RBP4.18□□□□□ -1.74
SCN11A-202ENST00000444237 DEFB127Q9H1M4 99 aa4.18□□□□□ -1.74
SCN11A-202ENST00000444237 IGHV1OR21-1A0A087WYE8 117 aa4.17□□□□□ -1.74
SCN11A-202ENST00000444237 IGKV1-39P01597 117 aa4.17□□□□□ -1.74
SCN11A-202ENST00000444237 IGKV1D-39P04432 117 aa4.17□□□□□ -1.74
SCN11A-202ENST00000444237 SAA1P0DJI8 122 aaPredicted RBP4.17□□□□□ -1.74
SCN11A-202ENST00000444237 TM2D2Q9BX73 214 aa4.17□□□□□ -1.74
SCN11A-202ENST00000444237 TSC2P49815 1807 aa4.17□□□□□ -1.74
SCN11A-202ENST00000444237 FRMPD3Q5JV73 1810 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms