RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 LINC01560Q8TB33 94 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 DDB2Q92466 427 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 DKK4Q9UBT3 224 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 CACNA1AO00555 2505 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 PRSS46E5RG02 174 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 NCR2O95944 276 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 ZNF883P0CG24 379 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 GDF5OSQ5U4N7 250 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 C17orf77Q96MU5 243 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 C2CD3Q4AC94 2353 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 SMIM27A0A1W2PRY6 76 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 ARMS2P0C7Q2 107 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 ARL3P36405 182 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM186Q96B77 213 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 UFC1Q9Y3C8 167 aa9.38□□□□□ -0.91
HCFC1-203ENST00000444191 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 IGHG3P01860 377 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 TCRAP04437 139 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 SCGB2A2Q13296 93 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 DEFB104AQ8WTQ1 72 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 THYN1Q9P016 225 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 GAGE10A6NGK3 116 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 CKS2P33552 79 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 MRPL52Q86TS9 123 aaKnown RBP9.37□□□□□ -0.91
HCFC1-203ENST00000444191 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 ZNF207O43670 478 aaKnown RBP9.37□□□□□ -0.91
HCFC1-203ENST00000444191 IGLV1-44P01699 117 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 LIPFP07098 398 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 MC5RP33032 325 aa9.37□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM265A0A087WTH1 108 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 IGLV2-8P01709 118 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 Q8TAT8 98 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 FXYD5Q96DB9 178 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 ADAMTS20P59510 1910 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM189A5PLL7 270 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 TM4SF5O14894 197 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 CFHR2P36980 270 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 LINC00322Q6ZN03 302 aaPredicted RBP9.36□□□□□ -0.91
HCFC1-203ENST00000444191 PPP1R27Q86WC6 154 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 CST9LQ9H4G1 147 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 GCSHP23434 173 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 C12orf54Q6X4T0 127 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 SCNM1Q9BWG6 230 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 KLK15Q9H2R5 256 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
HCFC1-203ENST00000444191 PTPN13Q12923 2485 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 PPIAL4CA0A0B4J2A2 164 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 PPIAL4GP0DN37 164 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 CACNG7P62955 275 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 ADIPOQQ15848 244 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 ECSCRQ19T08 205 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 SEM1Q6ZVN7 128 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
HCFC1-203ENST00000444191 IGHV1-24A0A0C4DH33 117 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 IGHV1-69-2A0A0G2JMI3 117 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 NPIPB5A8MRT5 1133 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 OCIAD2Q56VL3 154 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 FAM215AQ9Y5M1 114 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 SPTBN4Q9H254 2564 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 LAMA5O15230 3695 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 H3BUT2 72 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 OR10AG1Q8NH19 301 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM133Q9H2Q1 129 aa9.35□□□□□ -0.91
HCFC1-203ENST00000444191 C22orf46C9J442 243 aa9.34□□□□□ -0.91
HCFC1-203ENST00000444191 EVI2AP22794 236 aa9.34□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM249Q2WGJ8 235 aa9.34□□□□□ -0.91
HCFC1-203ENST00000444191 PRSS57Q6UWY2 283 aa9.34□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM167AQ8TBQ9 72 aa9.34□□□□□ -0.91
HCFC1-203ENST00000444191 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
HCFC1-203ENST00000444191 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
HCFC1-203ENST00000444191 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
HCFC1-203ENST00000444191 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
HCFC1-203ENST00000444191 TMEM213A2RRL7 107 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 C7orf71A4D174 169 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 IFI27P40305 119 aaPredicted RBP9.33□□□□□ -0.92
HCFC1-203ENST00000444191 RUSC1-AS1Q66K80 236 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 AMN1Q8IY45 258 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 PRELID3AQ96N28 172 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 CHODLQ9H9P2 273 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 TMEM238C9JI98 176 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 D6R8Y8 96 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 GOSR1O95249 250 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 CD3EP07766 207 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 GPR183P32249 361 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 LGALS7P47929 136 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 Q71RC1 249 aaPredicted RBP9.33□□□□□ -0.92
HCFC1-203ENST00000444191 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 MRPL27Q9P0M9 148 aaKnown RBP9.33□□□□□ -0.92
HCFC1-203ENST00000444191 TIMM23O14925 209 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 KLRD1Q13241 179 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 GTSF1Q8WW33 167 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 FMC1Q96HJ9 113 aa9.33□□□□□ -0.92
HCFC1-203ENST00000444191 PSG8Q9UQ74 426 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms