RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SCGB1D4Q6XE38 83 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 VN1R4Q7Z5H5 301 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 TNFSF12O43508 249 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 PTHLHP12272 177 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 FHL1Q13642 323 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 SLC48A1Q6P1K1 146 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 Q6ZS52 159 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 DEFB119Q8N690 84 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 PPP1R1CQ8WVI7 109 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 CCL17Q92583 94 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 NABP1Q96AH0 204 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 TM2D3Q9BRN9 247 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 Q9HAA7 133 aa8.26□□□□□ -1.09
SYNE2-206ENST00000441438 SS18L1O75177 396 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-206ENST00000441438 CRYGAP11844 174 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 DAD1P61803 113 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 NSUN5P1Q3KNT7 163 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 DPPA3Q6W0C5 159 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 WDR86Q86TI4 376 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 SPACA3Q8IXA5 215 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 C11orf68Q9H3H3 251 aaKnown RBP8.25□□□□□ -1.09
SYNE2-206ENST00000441438 TRAV13-1A0A0B4J241 112 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 CD3DP04234 171 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 PHLDA1Q8WV24 401 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-206ENST00000441438 GNB4Q9HAV0 340 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 CYTL1Q9NRR1 136 aa8.25□□□□□ -1.09
SYNE2-206ENST00000441438 EPM2AB3EWF7 344 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 TCRAP04437 139 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 OPRM1P35372 400 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 MSMO1Q15800 293 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 Q6ZVQ6 151 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 LINC00596Q86U02 117 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 SLC25A42Q86VD7 318 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 OR10P1Q8NGE3 313 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 OR2T10Q8NGZ9 312 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 SDK2Q58EX2 2172 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 TRBV24-1A0A075B6N3 115 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 A0A087WZ39 114 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 A8MWV9 139 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 SNCGO76070 127 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 NANOS3P60323 173 aaKnown RBP8.24□□□□□ -1.09
SYNE2-206ENST00000441438 LSM10Q969L4 123 aaKnown RBP8.24□□□□□ -1.09
SYNE2-206ENST00000441438 ZNF501Q96CX3 271 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-206ENST00000441438 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 PARLQ9H300 379 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 TAAR3PQ9P1P4 343 aa8.24□□□□□ -1.09
SYNE2-206ENST00000441438 LINC00869P0C866 280 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 RPS21P63220 83 aaKnown RBP8.23□□□□□ -1.09
SYNE2-206ENST00000441438 MRPL2Q5T653 305 aaKnown RBP8.23□□□□□ -1.09
SYNE2-206ENST00000441438 SCGB1C1Q8TD33 95 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 SLC25A1P53007 311 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 TAS2R45P59539 299 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 Q6ZS46 218 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 NMES1Q9C002 83 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 C9JQL5 133 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 APOMO95445 188 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 CYCSP99999 105 aaKnown RBP8.23□□□□□ -1.09
SYNE2-206ENST00000441438 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 OR52N5Q8NH56 324 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 GNPNAT1Q96EK6 184 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-206ENST00000441438 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 PAXXQ9BUH6 204 aa8.23□□□□□ -1.09
SYNE2-206ENST00000441438 PITX3O75364 302 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 FABP2P12104 132 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 EBI3Q14213 229 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 TMEM230Q96A57 120 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 ASPMQ8IZT6 3477 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 IGKV1D-13A0A0B4J2D9 117 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 CD55P08174 381 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 IGKV1-13P0DP09 117 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 FOXC1Q12948 553 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 MORN3Q6PF18 240 aaPredicted RBP8.22□□□□□ -1.09
SYNE2-206ENST00000441438 TMEM75Q8N9X5 138 aa8.22□□□□□ -1.09
SYNE2-206ENST00000441438 C3orf85A0A1B0GTC6 90 aa8.21□□□□□ -1.09
SYNE2-206ENST00000441438 PSMB3P49720 205 aa8.21□□□□□ -1.09
SYNE2-206ENST00000441438 Q56UQ5 140 aa8.21□□□□□ -1.09
SYNE2-206ENST00000441438 LINC00114Q6XXX2 140 aa8.21□□□□□ -1.09
SYNE2-206ENST00000441438 FAM19A3Q7Z5A8 133 aa8.21□□□□□ -1.09
SYNE2-206ENST00000441438 OTOGLQ3ZCN5 2332 aa8.21□□□□□ -1.09
SYNE2-206ENST00000441438 PCNX3Q9H6A9 2034 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 H0YGG7 62 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 NDUFB2O95178 105 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 IFI6P09912 130 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 PYYP10082 97 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 Q6ZS92 163 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 DCANP1Q8TF63 244 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 AQP10Q96PS8 301 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 RBMY1BA6NDE4 496 aaKnown RBP8.21□□□□□ -1.1
SYNE2-206ENST00000441438 RBMY1EA6NEQ0 496 aaKnown RBP8.21□□□□□ -1.1
SYNE2-206ENST00000441438 C17orf51A8MQB3 221 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 H3BUT2 72 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 RBMY1DP0C7P1 496 aaKnown RBP8.21□□□□□ -1.1
SYNE2-206ENST00000441438 RBMY1A1P0DJD3 496 aaKnown RBP8.21□□□□□ -1.1
SYNE2-206ENST00000441438 RPS27P42677 84 aaKnown RBP8.21□□□□□ -1.1
SYNE2-206ENST00000441438 ETDBQ3ZM63 59 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 VGLL1Q99990 258 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms