RNA–Protein interactions for RNA: ENST00000440984.3

ZNF140-208, Transcript of zinc finger protein 140, human

TSL 3

Gene ZNF140, Length 529 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF140-208	ENST00000440984	TSPAN4	O14817	238 aa		14	□□□□□ -0.17
ZNF140-208	ENST00000440984	RAB2A	P61019	212 aa		14	□□□□□ -0.17
ZNF140-208	ENST00000440984	EGFEM1P	Q0D2K5	195 aa		14	□□□□□ -0.17
ZNF140-208	ENST00000440984	GUCA2B	Q16661	112 aa		14	□□□□□ -0.17
ZNF140-208	ENST00000440984	MRPL32	Q9BYC8	188 aa	Known RBP	14	□□□□□ -0.17
ZNF140-208	ENST00000440984	SEPSECS	Q9HD40	501 aa	Known RBP	14	□□□□□ -0.17
ZNF140-208	ENST00000440984	CMYA5	Q8N3K9	4069 aa		14	□□□□□ -0.17
ZNF140-208	ENST00000440984	ZNF785	A8K8V0	405 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	BOLA2-SMG1P6	H3BVE0	249 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	SEC11B	P0C7V7	166 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	RPL7	P18124	248 aa	Known RBP	13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	GALR1	P47211	349 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	RHOB	P62745	196 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	PAFAH1B2	P68402	229 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	MORN5	Q5VZ52	161 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	OR10G4	Q8NGN3	311 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	OR10G9	Q8NGN4	311 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	OR10G7	Q8NGN6	311 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	SPAG8	Q99932	426 aa	Predicted RBP	13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	FUT9	Q9Y231	359 aa		13.99	□□□□□ -0.17
ZNF140-208	ENST00000440984	IGKV3-7	A0A075B6H7	116 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	TRAV5	A0A0B4J249	113 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984		A0A1W2PPV4	95 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	TMEM41B	Q5BJD5	291 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	AKR1C8P	Q5T2L2	129 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	SPATA31B1P	Q5VZV4	182 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	MIR17HG	Q75NE6	70 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	BOLA1	Q9Y3E2	137 aa		13.98	□□□□□ -0.17
ZNF140-208	ENST00000440984	PKD1L1	Q8TDX9	2849 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	BEAN1	Q3B7T3	259 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	EIF5AL1	Q6IS14	154 aa	Known RBP	13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	FAM122C	Q6P4D5	195 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	BPIFA4P	Q86YQ2	179 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	GBGT1	Q8N5D6	347 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	RPP25L	Q8N5L8	163 aa	Known RBP	13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	STXBP6	Q8NFX7	210 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	MS4A6A	Q9H2W1	248 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	RPRM	Q9NS64	109 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	MGAM2	Q2M2H8	2515 aa		13.97	□□□□□ -0.17
ZNF140-208	ENST00000440984	SORL1	Q92673	2214 aa		13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	DNASE2	O00115	360 aa	Predicted RBP	13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	GP9	P14770	177 aa		13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	KRTAP10-11	P60412	298 aa		13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	KPRP	Q5T749	579 aa	Predicted RBP	13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	TMED6	Q8WW62	240 aa		13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	SMAD5-AS1	Q9Y6J3	95 aa		13.96	□□□□□ -0.17
ZNF140-208	ENST00000440984	TRAV2	A0A0B4J234	112 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	OR4C46	A6NHA9	309 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	UMAD1	C9J7I0	102 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	MRPS12	O15235	138 aa	Known RBP	13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	ATF4	P18848	351 aa	Predicted RBP	13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	TFPI2	P48307	235 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	TAS2R45	P59539	299 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	WFDC3	Q8IUB2	231 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	FAM167A-AS1	Q96KT0	104 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	NRN1	Q9NPD7	142 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	TMEM14C	Q9P0S9	112 aa		13.95	□□□□□ -0.18
ZNF140-208	ENST00000440984	CDC34	P49427	236 aa	Predicted RBP	13.94	□□□□□ -0.18
ZNF140-208	ENST00000440984	SLC25A2	Q9BXI2	301 aa		13.94	□□□□□ -0.18
ZNF140-208	ENST00000440984	PLA2G2E	Q9NZK7	142 aa		13.94	□□□□□ -0.18
ZNF140-208	ENST00000440984		K7EQG2	157 aa		13.93	□□□□□ -0.18
ZNF140-208	ENST00000440984	MEOX2	P50222	304 aa		13.93	□□□□□ -0.18
ZNF140-208	ENST00000440984	KHDC3L	Q587J8	217 aa		13.93	□□□□□ -0.18
ZNF140-208	ENST00000440984	DCANP1	Q8TF63	244 aa		13.93	□□□□□ -0.18
ZNF140-208	ENST00000440984	RAB24	Q969Q5	203 aa		13.93	□□□□□ -0.18
ZNF140-208	ENST00000440984	OR51M1	Q9H341	326 aa		13.93	□□□□□ -0.18
ZNF140-208	ENST00000440984		A0A087X0K7	114 aa		13.92	□□□□□ -0.18
ZNF140-208	ENST00000440984	SAMD13	Q5VXD3	122 aa		13.92	□□□□□ -0.18
ZNF140-208	ENST00000440984	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.92	□□□□□ -0.18
ZNF140-208	ENST00000440984	GTSCR1	Q86UQ5	136 aa		13.92	□□□□□ -0.18
ZNF140-208	ENST00000440984	PRR25	Q96S07	402 aa		13.92	□□□□□ -0.18
ZNF140-208	ENST00000440984	HRH4	Q9H3N8	390 aa		13.92	□□□□□ -0.18
ZNF140-208	ENST00000440984	CTXND1	A0A1B0GTU2	59 aa		13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	HMGB3	O15347	200 aa	Known RBP	13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	OR7C2	O60412	319 aa		13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	EIF3G	O75821	320 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	IGLC2	P0DOY2	106 aa		13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	PYY	P10082	97 aa		13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	HIST1H1E	P10412	219 aa	Known RBP	13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	C17orf77	Q96MU5	243 aa		13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984	PAXX	Q9BUH6	204 aa		13.91	□□□□□ -0.18
ZNF140-208	ENST00000440984		H3BQ15	152 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	STAG3L2	P0CL84	134 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	STAG3L3	P0CL85	134 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	ID1	P41134	155 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	RAB5C	P51148	216 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	CMC4	P56277	68 aa	Predicted RBP	13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	CD81	P60033	236 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	GUK1	Q16774	197 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	DPPA3	Q6W0C5	159 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	PQLC2	Q6ZP29	291 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	RNF141	Q8WVD5	230 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	PHYHIPL	Q96FC7	376 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	ZNF586	Q9NXT0	402 aa		13.9	□□□□□ -0.18
ZNF140-208	ENST00000440984	SNRPC	P09234	159 aa	Known RBP	13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	CD7	P09564	240 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	FHIT	P49789	147 aa		13.89	□□□□□ -0.19
ZNF140-208	ENST00000440984	ZNF726P1	Q15940	193 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms