RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 HIST1H2BBP33778 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 NDUFA6P56556 154 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST1H2BDP58876 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST1H2BCP62807 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 RPL19P84098 196 aaKnown RBP16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST2H2BEQ16778 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 Q6ZS46 218 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST1H2BHQ93079 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST1H2BNQ99877 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HIST1H2BMQ99879 126 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 GSX1Q9H4S2 264 aaPredicted RBP16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 GNG7O60262 68 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 S100A9P06702 114 aaKnown RBP16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 TRGC1P0CF51 173 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 HOXA5P20719 270 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 ERVFC1-1P60608 527 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 ZNF329Q86UD4 541 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 NPFFR1Q9GZQ6 430 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 TMEM14CQ9P0S9 112 aa16.73■□□□□ 0.27
CDKN1C-204ENST00000440480 TRAV41A0A0B4J266 112 aa16.72■□□□□ 0.27
CDKN1C-204ENST00000440480 IGKV1-17P01599 117 aa16.72■□□□□ 0.27
CDKN1C-204ENST00000440480 YPEL3P61236 119 aaPredicted RBP16.72■□□□□ 0.27
CDKN1C-204ENST00000440480 IL36BQ9NZH7 164 aa16.72■□□□□ 0.27
CDKN1C-204ENST00000440480 LINC00527Q9UJ94 153 aa16.72■□□□□ 0.27
CDKN1C-204ENST00000440480 K7EN84 100 aa16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 PEX7O00628 323 aa16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 FAM110DQ8TAY7 271 aaPredicted RBP16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 FRZBQ92765 325 aa16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 FANCD2OSQ96PS1 177 aa16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 SLC25A39Q9BZJ4 359 aaPredicted RBP16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 PRSS22Q9GZN4 317 aa16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 MRPL27Q9P0M9 148 aaKnown RBP16.71■□□□□ 0.27
CDKN1C-204ENST00000440480 GCGP01275 180 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 CRIP2P52943 208 aaPredicted RBP16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 RANP62826 216 aaKnown RBP16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 OSTCQ9NRP0 149 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 ZNF320A2RRD8 509 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 INAFM1C9JVW0 142 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 GP9P14770 177 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 MYCNOSP40205 109 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 CDX1P47902 265 aaPredicted RBP16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 ZNF418Q8TF45 676 aaPredicted RBP16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 BLNKQ8WV28 456 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 TXN2Q99757 166 aa16.7■□□□□ 0.26
CDKN1C-204ENST00000440480 DNAJC9-AS1A6NH13 148 aa16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 ISLRO14498 428 aa16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 S100A7P31151 101 aa16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 IGF2BP2-AS1Q96M15 143 aa16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 NOL4LQ96MY1 436 aaPredicted RBP16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 C21orf62Q9NYP8 219 aa16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 EPDR1Q9UM22 224 aa16.69■□□□□ 0.26
CDKN1C-204ENST00000440480 PGPA6NDG6 321 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 SLC25A5P05141 298 aaKnown RBP16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 HIST1H1EP10412 219 aaKnown RBP16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 RPEL1Q2QD12 228 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 Q56UQ5 140 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 SMIM12Q96EX1 92 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 MTORP42345 2549 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 F8P00451 2351 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 PHOX2AO14813 284 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 UBE2G1P62253 170 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 BPIFA4PQ86YQ2 179 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 C5orf17Q8NAS9 161 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 RNF125Q96EQ8 232 aa16.68■□□□□ 0.26
CDKN1C-204ENST00000440480 ANK3Q12955 4377 aaKnown RBP16.67■□□□□ 0.26
CDKN1C-204ENST00000440480 MEOX2P50222 304 aa16.67■□□□□ 0.26
CDKN1C-204ENST00000440480 ZNF600Q6ZNG1 722 aa16.67■□□□□ 0.26
CDKN1C-204ENST00000440480 ZNF491Q8N8L2 437 aa16.67■□□□□ 0.26
CDKN1C-204ENST00000440480 SHANK2-AS3Q9BTD1 123 aa16.67■□□□□ 0.26
CDKN1C-204ENST00000440480 ESM1Q9NQ30 184 aa16.67■□□□□ 0.26
CDKN1C-204ENST00000440480 WI2-2373I1.2A0A1W2PRP0 233 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 OR2J3O76001 311 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 SMIM6P0DI80 62 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 MGST1P10620 155 aaKnown RBP16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 TMEM183BQ1AE95 376 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 C19orf54Q5BKX5 351 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 ACTL10Q5JWF8 245 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 VN1R17PQ8TDU5 208 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 C12orf57Q99622 126 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 CHRDL1Q9BU40 450 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 FAM181BA6NEQ2 426 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 ZNF98A6NK75 572 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 IL4P05112 153 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 FCGR2BP31994 310 aaPredicted RBP16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 OR5I1Q13606 314 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 IBA57Q5T440 356 aaKnown RBP16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 BAGE2Q86Y30 109 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 OR4F17Q8NGA8 305 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 ATG101Q9BSB4 218 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 FBXL7Q9UJT9 491 aa16.66■□□□□ 0.26
CDKN1C-204ENST00000440480 H3BRN7 92 aa16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 S100A2P29034 98 aa16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 PPIFP30405 207 aaKnown RBP16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 MS4A10Q96PG2 267 aa16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 OTORQ9NRC9 128 aa16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 GAR1Q9NY12 217 aaKnown RBP16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 ZNF580Q9UK33 172 aa16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 V9GYV3 84 aa16.65■□□□□ 0.26
CDKN1C-204ENST00000440480 NDUFB8O95169 186 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms