RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 ZNF207O43670 478 aaKnown RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 ATP5LO75964 103 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 SOD3P08294 240 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 SRSF4Q08170 494 aaKnown RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 TMEM249Q2WGJ8 235 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 C22orf34Q6ZV56 151 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 ERASQ7Z444 233 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 TMEM219Q86XT9 240 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 OR10AG1Q8NH19 301 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 SFRP2Q96HF1 295 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 RPP21Q9H633 154 aaKnown RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 MRPL27Q9P0M9 148 aaKnown RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 PSG8Q9UQ74 426 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 MRPS16Q9Y3D3 137 aaKnown RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 STAG3L2P0CL84 134 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 STAG3L3P0CL85 134 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 RNASE2P10153 161 aaKnown RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 TFF3Q07654 80 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 PMCHL1Q16048 86 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 Q1RN00 199 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 TREML4Q6UXN2 200 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 REC114Q7Z4M0 266 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 FER1L6-AS1Q8NA97 138 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 OR1N2Q8NGR9 330 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 ALKBH7Q9BT30 221 aaPredicted RBP3.67□□□□□ -1.82
SCN3A-204ENST00000440431 LY96Q9Y6Y9 160 aa3.67□□□□□ -1.82
SCN3A-204ENST00000440431 TACC2O95359 2948 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IGHV3OR16-13A0A075B7E8 117 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IGHV3-74A0A0B4J1X5 117 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 LHBP01229 141 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IGKV1-5P01602 117 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IGHV3-48P01763 117 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IGHV3-23P01764 117 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 PSG1P11464 419 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 CD24P25063 80 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 ZNF415Q09FC8 603 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 SCGB1D4Q6XE38 83 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 MIR17HGQ75NE6 70 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 SVIPQ8NHG7 77 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 SMIM12Q96EX1 92 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 C2orf88Q9BSF0 95 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 PRADC1Q9BSG0 188 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 RNF126Q9BV68 326 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 GGTLC1Q9BX51 225 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 GEMIN7Q9H840 131 aaKnown RBP3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IL36BQ9NZH7 164 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 ZNF581Q9P0T4 197 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 A0A087WWC5 75 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 TMEM238LA0A1B0GVL6 79 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 A6NJY4 79 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 COLCA2A8K830 154 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 NUDT3O95989 172 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
SCN3A-204ENST00000440431 ZNF138P52744 262 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 RPL15P61313 204 aaKnown RBP3.66□□□□□ -1.82
SCN3A-204ENST00000440431 SLC25A39Q9BZJ4 359 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-204ENST00000440431 NRN1Q9NPD7 142 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 TMEM14BQ9NUH8 114 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 JKAMPQ9P055 326 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 TRBV20OR9-2A0A075B6H5 130 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 IGHV3-49A0A0A0MS15 119 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 RNF222A6NCQ9 220 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 LINC00473A8K010 186 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 H3BRM9 83 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 C15orf65H3BRN8 121 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 LY6HO94772 140 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 GHRHP01286 108 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 INSP01308 110 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 PMS2P11Q13670 270 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 C10orf91Q5T1B1 145 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 TOMM20LQ6UXN7 152 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 PGLYRP4Q96LB8 373 aa3.66□□□□□ -1.82
SCN3A-204ENST00000440431 TSSC4Q9Y5U2 329 aaPredicted RBP3.66□□□□□ -1.82
SCN3A-204ENST00000440431 TMEM50AO95807 157 aa3.65□□□□□ -1.82
SCN3A-204ENST00000440431 IGKV3-20P01619 116 aa3.65□□□□□ -1.82
SCN3A-204ENST00000440431 SRP19P09132 144 aaKnown RBP3.65□□□□□ -1.82
SCN3A-204ENST00000440431 APOC4P55056 127 aa3.65□□□□□ -1.82
SCN3A-204ENST00000440431 RHPN1-AS1Q9BWJ2 59 aa3.65□□□□□ -1.82
SCN3A-204ENST00000440431 NDUFA4L2Q9NRX3 87 aa3.65□□□□□ -1.82
SCN3A-204ENST00000440431 CARHSP1Q9Y2V2 147 aaKnown RBP3.65□□□□□ -1.82
SCN3A-204ENST00000440431 NOTCH2Q04721 2471 aa3.65□□□□□ -1.82
SCN3A-204ENST00000440431 TRGV4A0A0C4DH28 118 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 A0A1B0GW64 132 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 C9JCJ5 164 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 TFF1P04155 84 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 CD7P09564 240 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 FOXE3Q13461 319 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 COTL1Q14019 142 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 LBHQ53QV2 105 aaPredicted RBP3.65□□□□□ -1.83
SCN3A-204ENST00000440431 CDPF1Q6NVV7 123 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 C1QL4Q86Z23 238 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 PRDM13Q9H4Q3 707 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 AP5S1Q9NUS5 200 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 UTP20O75691 2785 aaKnown RBP3.65□□□□□ -1.83
SCN3A-204ENST00000440431 CUBNO60494 3623 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 PRR14LQ5THK1 2151 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 MED13LQ71F56 2210 aa3.65□□□□□ -1.83
SCN3A-204ENST00000440431 SPTBN4Q9H254 2564 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms