RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 HBE1P02100 147 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 AMBPP02760 352 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 LINC00869P0C866 280 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 RRAS2P62070 204 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-204ENST00000439619 C12orf74Q32Q52 190 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 ZNF709Q8N972 641 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 TMEM208Q9BTX3 173 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 SLC25A39Q9BZJ4 359 aaPredicted RBP13.53□□□□□ -0.24
CCDC78-204ENST00000439619 SLC35B3Q9H1N7 401 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 CELA1Q9UNI1 258 aa13.53□□□□□ -0.24
CCDC78-204ENST00000439619 EPPK1P58107 5090 aaKnown RBP13.53□□□□□ -0.24
CCDC78-204ENST00000439619 HYDINQ4G0P3 5121 aa13.52□□□□□ -0.24
CCDC78-204ENST00000439619 L7N2F9 121 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 BTCP35070 178 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 VAMP2P63027 116 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 TEPPQ6URK8 271 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 TMEM182Q6ZP80 229 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-204ENST00000439619 ZNF767PQ75MW2 155 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 ZBTB8BQ8NAP8 495 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-204ENST00000439619 LRRC20Q8TCA0 184 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 SDHCQ99643 169 aaPredicted RBP13.52□□□□□ -0.25
CCDC78-204ENST00000439619 SHANK2-AS3Q9BTD1 123 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 NDUFAF3Q9BU61 184 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 SCRT1Q9BWW7 348 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 C20orf85Q9H1P6 137 aa13.52□□□□□ -0.25
CCDC78-204ENST00000439619 H3BRN7 92 aa13.51□□□□□ -0.25
CCDC78-204ENST00000439619 PLP1P60201 277 aa13.51□□□□□ -0.25
CCDC78-204ENST00000439619 PXDC1Q5TGL8 231 aa13.51□□□□□ -0.25
CCDC78-204ENST00000439619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.51□□□□□ -0.25
CCDC78-204ENST00000439619 GGACTQ9BVM4 153 aa13.51□□□□□ -0.25
CCDC78-204ENST00000439619 PMS2P5A8MQ11 134 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 GOSR2O14653 212 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 LYRM1O43325 122 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 RRN3P1Q2M238 152 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 ZNF546Q86UE3 836 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 C20orf173Q96LM9 149 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 ARL6Q9H0F7 186 aa13.5□□□□□ -0.25
CCDC78-204ENST00000439619 AGRNO00468 2067 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 K7EPK0 472 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 P0DMU3 169 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 FAM231AP0DMU4 169 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 FAM231CP0DMU5 169 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 IGF2BP2-AS1Q96M15 143 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 PPP1R14DQ9NXH3 145 aa13.49□□□□□ -0.25
CCDC78-204ENST00000439619 LOC102723971A0A1B0GUV8 181 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 FAM25EA8MYX2 175 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 CNN1P51911 297 aaKnown RBP13.48□□□□□ -0.25
CCDC78-204ENST00000439619 B2MP61769 119 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 PRR20EP86478 221 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 PRR20CP86479 221 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 PRR20DP86480 221 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 PRR20BP86481 221 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 PRR20AP86496 221 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 RAB31Q13636 194 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 GSG1LQ6UXU4 331 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 FAM210BQ96KR6 192 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 NIPSNAP3BQ9BS92 247 aa13.48□□□□□ -0.25
CCDC78-204ENST00000439619 C7orf66A4D0T2 115 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 C5orf51A6NDU8 294 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 CCNKO75909 580 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 INSP01308 110 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 MBPP02686 304 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-204ENST00000439619 TCRBP04435 133 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 PVALBP20472 110 aaPredicted RBP13.47□□□□□ -0.25
CCDC78-204ENST00000439619 BCAP31P51572 246 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 SLC38A11Q08AI6 406 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 UHRF2Q96PU4 802 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 ARV1Q9H2C2 271 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
CCDC78-204ENST00000439619 RCL1Q9Y2P8 373 aaKnown RBP13.47□□□□□ -0.25
CCDC78-204ENST00000439619 TRAV6A0A075B6T7 132 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 A8MTW9 85 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 PLA2G10O15496 165 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 C1orf158Q8N1D5 194 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 RNF182Q8N6D2 247 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 ZNF431Q8TF32 576 aaPredicted RBP13.46□□□□□ -0.25
CCDC78-204ENST00000439619 CCDC32Q9BV29 185 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 NUDT15Q9NV35 164 aa13.46□□□□□ -0.25
CCDC78-204ENST00000439619 A0A087X0K7 114 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 TRAV8-2A0A0B4J237 113 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 AGPAT2O15120 278 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 COX7A2P2O60397 106 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 CAV2P51636 162 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 RHOBP62745 196 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 OXA1LQ15070 435 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 SPINK13Q1W4C9 94 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 IGFL4Q6B9Z1 124 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 AMTNQ6UX39 209 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 OR11H7Q8NGC8 314 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 C17orf77Q96MU5 243 aa13.45□□□□□ -0.26
CCDC78-204ENST00000439619 LSM5Q9Y4Y9 91 aaKnown RBP13.45□□□□□ -0.26
CCDC78-204ENST00000439619 YTHDF2Q9Y5A9 579 aaKnown RBP13.45□□□□□ -0.26
CCDC78-204ENST00000439619 CCSO14618 274 aa13.44□□□□□ -0.26
CCDC78-204ENST00000439619 CXCL2P19875 107 aa13.44□□□□□ -0.26
CCDC78-204ENST00000439619 HIST1H1AQ02539 215 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-204ENST00000439619 LCN15Q6UWW0 184 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms