RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 CTSZQ9UBR2 303 aa9.93□□□□□ -0.82
TCOF1-205ENST00000439160 SRRM4A7MD48 611 aaKnown RBP9.92□□□□□ -0.82
TCOF1-205ENST00000439160 LBHQ53QV2 105 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-205ENST00000439160 IGFL4Q6B9Z1 124 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 NDUFA4L2Q9NRX3 87 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 IGKV2-40A0A087WW87 121 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-205ENST00000439160 A0A1B0GW64 132 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 IGKV2D-40P01614 121 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-205ENST00000439160 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 MSMBP08118 114 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 GZMBP10144 247 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 MUC22E2RYF6 1773 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-205ENST00000439160 C10orf142B7Z368 130 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 M0R3E3 92 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 SERF1AO75920 110 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 APOHP02749 345 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-205ENST00000439160 LINC00479Q96M42 142 aa9.92□□□□□ -0.82
TCOF1-205ENST00000439160 C22orf46C9J442 243 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 UBE2E1P51965 193 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 IL15RAQ13261 267 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 TCRAP04437 139 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 ADMP35318 185 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 TLN2Q9Y4G6 2542 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 HIVEP2P31629 2446 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 NPIPB6E9PJ23 425 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 AMBPP02760 352 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 C14orf144Q96I85 54 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 UQCR10Q9UDW1 63 aa9.91□□□□□ -0.82
TCOF1-205ENST00000439160 TRAV9-1A0A075B6T8 112 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 PSMB11A5LHX3 300 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 LDLRAD2Q5SZI1 272 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 FAM90A2PQ658T7 463 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 Q6AWC8 147 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 HAPLN4Q86UW8 402 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 TMEM170AQ8WVE7 144 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 ASCL2Q99929 193 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 KAAG1Q9UBP8 84 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 DYSFO75923 2080 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 TRBV24-1A0A075B6N3 115 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 G3V318 75 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 SLC25A16P16260 332 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 NUTF2P61970 127 aaKnown RBP9.9□□□□□ -0.82
TCOF1-205ENST00000439160 JOSD1Q15040 202 aaPredicted RBP9.9□□□□□ -0.82
TCOF1-205ENST00000439160 KIR2DL4Q99706 377 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 NDUFAF3Q9BU61 184 aa9.9□□□□□ -0.82
TCOF1-205ENST00000439160 ATP6V0E1O15342 81 aa9.9□□□□□ -0.83
TCOF1-205ENST00000439160 Q8TAT8 98 aa9.9□□□□□ -0.83
TCOF1-205ENST00000439160 RPL24P83731 157 aaKnown RBP9.89□□□□□ -0.83
TCOF1-205ENST00000439160 MSMPQ1L6U9 139 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 PARD6GQ9BYG4 376 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-205ENST00000439160 SOX21Q9Y651 276 aaPredicted RBP9.89□□□□□ -0.83
TCOF1-205ENST00000439160 LINC00311Q8N616 119 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 OR1N2Q8NGR9 330 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 DUX3Q96PT4 197 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 PEMTQ9UBM1 199 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 IGHV2-70DA0A0C4DH43 119 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 NDUFS8O00217 210 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 ORMDL3Q8N138 153 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 LINC01356Q8N9X3 169 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 TMEM242Q9NWH2 141 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 C7orf71A4D174 169 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 CD7P09564 240 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 AMMECR1LQ6DCA0 310 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 Q8NA96 180 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 TSKUQ8WUA8 353 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 IGFBPL1Q8WX77 278 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 CEP192Q8TEP8 1941 aa9.89□□□□□ -0.83
TCOF1-205ENST00000439160 LHBP01229 141 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 PSMG4Q5JS54 123 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 TMEM70Q9BUB7 260 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 FBLL1A6NHQ2 334 aaKnown RBP9.88□□□□□ -0.83
TCOF1-205ENST00000439160 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 NDUFB8O95169 186 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 PRB1P04280 392 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
TCOF1-205ENST00000439160 COTL1Q14019 142 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 ZNF726P1Q15940 193 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 LINC01587Q99440 93 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 IGHV1-69DA0A0B4J2H0 117 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 IGHV1-69P01742 117 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 TDGF1P3P51864 188 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 ZNF324O75467 553 aaPredicted RBP9.87□□□□□ -0.83
TCOF1-205ENST00000439160 Q5PR19 223 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 ST6GALNAC6Q969X2 333 aa9.87□□□□□ -0.83
TCOF1-205ENST00000439160 TRBV7-1A0A0A6YYK4 115 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 TMEM256Q8N2U0 113 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 BEX4Q9NWD9 120 aaPredicted RBP9.86□□□□□ -0.83
TCOF1-205ENST00000439160 NAV3Q8IVL0 2385 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 A0A0C4DFX4 3053 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 TRAV21A0A0B4J279 112 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 OVOL3O00110 214 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 TOMM40O96008 361 aa9.86□□□□□ -0.83
TCOF1-205ENST00000439160 PCP4P48539 62 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms