RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SPAG8Q99932 426 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-208ENST00000438518 SCRT1Q9BWW7 348 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 FUT9Q9Y231 359 aa13.89□□□□□ -0.19
HDAC6-208ENST00000438518 IGHV3OR16-13A0A075B7E8 117 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 IGHV3-74A0A0B4J1X5 117 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 IGHV3-66A0A0C4DH42 116 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 A0A1W2PPV4 95 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 TAS2R45P59539 299 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 TMEM41BQ5BJD5 291 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 GCSAMLQ5JQS6 135 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 AKR1C8PQ5T2L2 129 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 OR10G4Q8NGN3 311 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 OR10G9Q8NGN4 311 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 OR10G7Q8NGN6 311 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 SLC25A22Q9H936 323 aa13.88□□□□□ -0.19
HDAC6-208ENST00000438518 BOLA2-SMG1P6H3BVE0 249 aa13.87□□□□□ -0.19
HDAC6-208ENST00000438518 EGFEM1PQ0D2K5 195 aa13.87□□□□□ -0.19
HDAC6-208ENST00000438518 OXLD1Q5BKU9 147 aa13.87□□□□□ -0.19
HDAC6-208ENST00000438518 TMEM61Q8N0U2 210 aa13.87□□□□□ -0.19
HDAC6-208ENST00000438518 SEPSECSQ9HD40 501 aaKnown RBP13.87□□□□□ -0.19
HDAC6-208ENST00000438518 RAB5CP51148 216 aa13.86□□□□□ -0.19
HDAC6-208ENST00000438518 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
HDAC6-208ENST00000438518 TMEM14CQ9P0S9 112 aa13.86□□□□□ -0.19
HDAC6-208ENST00000438518 OR4C46A6NHA9 309 aa13.85□□□□□ -0.19
HDAC6-208ENST00000438518 CDC34P49427 236 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-208ENST00000438518 RAB2AP61019 212 aa13.85□□□□□ -0.19
HDAC6-208ENST00000438518 RPL11P62913 178 aaKnown RBP13.85□□□□□ -0.19
HDAC6-208ENST00000438518 KHDC3LQ587J8 217 aa13.85□□□□□ -0.19
HDAC6-208ENST00000438518 ACTR3CQ9C0K3 210 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-208ENST00000438518 NRN1Q9NPD7 142 aa13.85□□□□□ -0.19
HDAC6-208ENST00000438518 RPRMQ9NS64 109 aa13.85□□□□□ -0.19
HDAC6-208ENST00000438518 RFNGQ9Y644 331 aa13.85□□□□□ -0.19
HDAC6-208ENST00000438518 A0A087X0K7 114 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 GUK1Q16774 197 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 MORN5Q5VZ52 161 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 FAM122CQ6P4D5 195 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 PQLC2Q6ZP29 291 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 RPP25LQ8N5L8 163 aaKnown RBP13.84□□□□□ -0.19
HDAC6-208ENST00000438518 TMED6Q8WW62 240 aa13.84□□□□□ -0.19
HDAC6-208ENST00000438518 G3V4G9 280 aa13.83□□□□□ -0.2
HDAC6-208ENST00000438518 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
HDAC6-208ENST00000438518 ATF4P18848 351 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-208ENST00000438518 CMC4P56277 68 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-208ENST00000438518 KPRPQ5T749 579 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-208ENST00000438518 MIR17HGQ75NE6 70 aa13.83□□□□□ -0.2
HDAC6-208ENST00000438518 SLC25A2Q9BXI2 301 aa13.83□□□□□ -0.2
HDAC6-208ENST00000438518 MS4A6AQ9H2W1 248 aa13.83□□□□□ -0.2
HDAC6-208ENST00000438518 ZNF256Q9Y2P7 627 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-208ENST00000438518 CTXND1A0A1B0GTU2 59 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 ZNF785A8K8V0 405 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 DNASE2O00115 360 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-208ENST00000438518 GP9P14770 177 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 GUCA2BQ16661 112 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 BEAN1Q3B7T3 259 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 FAM110AQ9BQ89 295 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 OR51M1Q9H341 326 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 HRH4Q9H3N8 390 aa13.82□□□□□ -0.2
HDAC6-208ENST00000438518 IZUMO1RA6ND01 250 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 STAG3L2P0CL84 134 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 STAG3L3P0CL85 134 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 IGLC2P0DOY2 106 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 SPATA31B1PQ5VZV4 182 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 LCN15Q6UWW0 184 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 DCANP1Q8TF63 244 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 RAB24Q969Q5 203 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 FAM167A-AS1Q96KT0 104 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 CLEC5AQ9NY25 188 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 BOLA1Q9Y3E2 137 aa13.81□□□□□ -0.2
HDAC6-208ENST00000438518 CMYA5Q8N3K9 4069 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 PKD1L1Q8TDX9 2849 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 TRAV5A0A0B4J249 113 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 K7EQG2 157 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 OR7C2O60412 319 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 ZNF253O75346 499 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 HIST1H1EP10412 219 aaKnown RBP13.8□□□□□ -0.2
HDAC6-208ENST00000438518 SULT1A2P50226 295 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 PDE6HQ13956 83 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 GTSCR1Q86UQ5 136 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 SLC50A1Q9BRV3 221 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 PAXXQ9BUH6 204 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
HDAC6-208ENST00000438518 ISLRO14498 428 aa13.79□□□□□ -0.2
HDAC6-208ENST00000438518 CXorf1O96002 111 aa13.79□□□□□ -0.2
HDAC6-208ENST00000438518 ID1P41134 155 aa13.79□□□□□ -0.2
HDAC6-208ENST00000438518 PSMB3P49720 205 aa13.79□□□□□ -0.2
HDAC6-208ENST00000438518 RNF141Q8WVD5 230 aa13.79□□□□□ -0.2
HDAC6-208ENST00000438518 IGKV3-7A0A075B6H7 116 aa13.78□□□□□ -0.2
HDAC6-208ENST00000438518 SNRPD3P62318 126 aaKnown RBP13.78□□□□□ -0.2
HDAC6-208ENST00000438518 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.78□□□□□ -0.2
HDAC6-208ENST00000438518 TEX46H3BTG2 121 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 SOCS3O14543 225 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 UBE2L3P68036 154 aaKnown RBP13.77□□□□□ -0.21
HDAC6-208ENST00000438518 GBGT1Q8N5D6 347 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 FAM213BQ8TBF2 198 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 LRRC20Q8TCA0 184 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 FXYD5Q96DB9 178 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 TMEM167BQ9NRX6 74 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 SELENOKQ9Y6D0 94 aa13.77□□□□□ -0.21
HDAC6-208ENST00000438518 TRBV19A0A075B6N1 114 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms