RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 EMDP50402 254 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 MFAP2P55001 183 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 FKBP1BP68106 108 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 ADIGQ0VDE8 80 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 ZNF56Q15929 161 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 LY6KQ17RY6 165 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 FAM90A1Q86YD7 464 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 NEXN-AS1Q8NBZ9 246 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 OR52N5Q8NH56 324 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 PFN4Q8NHR9 129 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 TMEM190Q8WZ59 177 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 C16orf92Q96LL3 132 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 PDFQ9HBH1 243 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 RPUSD1Q9UJJ7 312 aaKnown RBP5.17□□□□□ -1.58
MCF2-205ENST00000437564 PLXNB3Q9ULL4 1909 aa5.17□□□□□ -1.58
MCF2-205ENST00000437564 NCOA6Q14686 2063 aaPredicted RBP5.17□□□□□ -1.58
MCF2-205ENST00000437564 A0A1B0GVT2 93 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 A0A1B0GXF2 115 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 PRSS46E5RG02 174 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 SPINK4O60575 86 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 LYPD3O95274 346 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 LIFP15018 202 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 CTLA4P16410 223 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 ZNF816Q0VGE8 651 aaPredicted RBP5.16□□□□□ -1.58
MCF2-205ENST00000437564 DEFB121Q5J5C9 76 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 KCTD18Q6PI47 426 aaPredicted RBP5.16□□□□□ -1.58
MCF2-205ENST00000437564 MARCH3Q86UD3 253 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 VKORC1L1Q8N0U8 176 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 LINC00482Q8N8I6 264 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 NFAM1Q8NET5 270 aaPredicted RBP5.16□□□□□ -1.58
MCF2-205ENST00000437564 KLK6Q92876 244 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 GPX7Q96SL4 187 aaPredicted RBP5.16□□□□□ -1.58
MCF2-205ENST00000437564 RTL8AQ9BWD3 113 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 C16orf95Q9H693 158 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 PLEKHA3Q9HB20 300 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 Q9UF83 564 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 PCSK5Q92824 1860 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 THSD7AQ9UPZ6 1657 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 SCO2A0A1W2PP80 73 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 TMEM150CB9EJG8 249 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 H3BVH4 76 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 MGST3O14880 152 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 IGHG2P01859 326 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 IGF1P05019 195 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 EFNA4P52798 201 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 ERVK-16P61578 105 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
MCF2-205ENST00000437564 RPL11P62913 178 aaKnown RBP5.16□□□□□ -1.58
MCF2-205ENST00000437564 HBBP68871 147 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 LINC00643Q86TS7 51 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 SERP2Q8N6R1 65 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 ZNF414Q96IQ9 312 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 ARHGAP5-AS1Q96IT6 56 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 PSENENQ9NZ42 101 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 RNF7Q9UBF6 113 aa5.16□□□□□ -1.58
MCF2-205ENST00000437564 FANCMQ8IYD8 2048 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 PLXNA2O75051 1894 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 A0A0A6YYD4 124 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 TRGV5A0A0B4J1U4 118 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 LOC107984156A0A0G2JMH3 177 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 A0A1B0GTH9 108 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 C19orf71A6NCJ1 209 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 PGPA6NDG6 321 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 IFI6P09912 130 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 CXCL8P10145 99 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 FHL1Q13642 323 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 TMEM155Q4W5P6 130 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 C22orf34Q6ZV56 151 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 C5orf38Q86SI9 138 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 ARL17AQ8IVW1 177 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 ZCCHC24Q8N2G6 241 aaKnown RBP5.15□□□□□ -1.58
MCF2-205ENST00000437564 RNF182Q8N6D2 247 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 IFI27L1Q96BM0 104 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 OTORQ9NRC9 128 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 STARD5Q9NSY2 213 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 BPTFQ12830 3046 aa5.15□□□□□ -1.58
MCF2-205ENST00000437564 TRBV7-3A0A075B6L6 115 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 H3BMM0 161 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 H3BTX0 84 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 SYNGR2O43760 224 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 C10orf105Q8TEF2 133 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 UBE2WQ96B02 151 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 UPK3BQ9BT76 320 aa5.15□□□□□ -1.59
MCF2-205ENST00000437564 PRSS38A1L453 326 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 USP17L23D6RBM5 183 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 FAM229AH3BQW9 127 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 M0R1B8 84 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 LTAP01374 205 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 CDAP32320 146 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 RPL18Q07020 188 aaKnown RBP5.14□□□□□ -1.59
MCF2-205ENST00000437564 GDF5OSQ5U4N7 250 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 Q6ZS46 218 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 OVCA2Q8WZ82 227 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 FMC1Q96HJ9 113 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 AICDAQ9GZX7 198 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 FGF22Q9HCT0 170 aa5.14□□□□□ -1.59
MCF2-205ENST00000437564 LHFPL6Q9Y693 200 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms