RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 DPF1Q92782 380 aa8.41□□□□□ -1.06
HMGCL-204ENST00000436439 EEF1AKMT3Q96AZ1 226 aa8.41□□□□□ -1.06
HMGCL-204ENST00000436439 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
HMGCL-204ENST00000436439 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
HMGCL-204ENST00000436439 C20orf24Q9BUV8 137 aa8.41□□□□□ -1.06
HMGCL-204ENST00000436439 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 CXorf65A6NEN9 183 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 GNG7O60262 68 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 CXorf1O96002 111 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 IGKV1-17P01599 117 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 ELANEP08246 267 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 RAB9AP51151 201 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 TPPP2P59282 170 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 CD81P60033 236 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 PLP1P60201 277 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 ATP5G2Q06055 141 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 FOXE3Q13461 319 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 RNF212Q495C1 297 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 MYOZ3Q8TDC0 251 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 MCRIP2Q9BUT9 160 aaKnown RBP8.4□□□□□ -1.06
HMGCL-204ENST00000436439 GPR61Q9BZJ8 451 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 TMPRSS5Q9H3S3 457 aa8.4□□□□□ -1.06
HMGCL-204ENST00000436439 CCL24O00175 119 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 HMGB3O15347 200 aaKnown RBP8.39□□□□□ -1.07
HMGCL-204ENST00000436439 PDE6DO43924 150 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 TOMM40O96008 361 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 STAG3L2P0CL84 134 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 STAG3L3P0CL85 134 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 AKR1C3P42330 323 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 ZNF90Q03938 601 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 HIST1H2BAQ96A08 127 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 CCDC140Q96MF4 163 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 MS4A10Q96PG2 267 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 MLXQ9UH92 298 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 PRELID1Q9Y255 219 aa8.39□□□□□ -1.07
HMGCL-204ENST00000436439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.38□□□□□ -1.07
HMGCL-204ENST00000436439 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 F6UZH7 168 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 PAGE4O60829 102 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 OR2C1O95371 312 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 CTSGP08311 255 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 KIAA0141Q14154 515 aaPredicted RBP8.38□□□□□ -1.07
HMGCL-204ENST00000436439 Q56UQ5 140 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 ZNF343Q6P1L6 599 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 GATAD1Q8WUU5 269 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 PFDN5Q99471 154 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 RNF2Q99496 336 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 SMIM7Q9BQ49 75 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 KLK15Q9H2R5 256 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 SDF2L1Q9HCN8 221 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 NAT8Q9UHE5 227 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 ARL2-SNX15V9GYD0 113 aa8.38□□□□□ -1.07
HMGCL-204ENST00000436439 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
HMGCL-204ENST00000436439 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 TGOLN2O43493 480 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 RD3LP0DJH9 198 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 ARL14EPLP0DKL9 152 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 PSG1P11464 419 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 CDX1P47902 265 aaPredicted RBP8.37□□□□□ -1.07
HMGCL-204ENST00000436439 TMEM241Q24JQ0 296 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 TIGITQ495A1 244 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 OR1L4Q8NGR5 311 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 YPEL4Q96NS1 127 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 PRR25Q96S07 402 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 CTDSP1Q9GZU7 261 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 S4R3C0 116 aa8.37□□□□□ -1.07
HMGCL-204ENST00000436439 OR2T8A6NH00 312 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 EIF3GO75821 320 aaKnown RBP eCLIP8.36□□□□□ -1.07
HMGCL-204ENST00000436439 CLEC3BP05452 202 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 OR5G3P0C626 314 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 RAB5AP20339 215 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 GATA2P23769 480 aaPredicted RBP8.36□□□□□ -1.07
HMGCL-204ENST00000436439 GCHFRP30047 84 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 ADMP35318 185 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 CLEC19AQ6UXS0 136 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 ZNF600Q6ZNG1 722 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 ZNF491Q8N8L2 437 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 OR51G1Q8NGK1 321 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 UBE2E2Q96LR5 201 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 MRPL32Q9BYC8 188 aaKnown RBP8.36□□□□□ -1.07
HMGCL-204ENST00000436439 DNAJC4Q9NNZ3 241 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 TECRQ9NZ01 308 aaKnown RBP8.36□□□□□ -1.07
HMGCL-204ENST00000436439 FUT9Q9Y231 359 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 NBEAL2Q6ZNJ1 2754 aa8.36□□□□□ -1.07
HMGCL-204ENST00000436439 C1orf196B1AJZ1 125 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 IGHV3-23P01764 117 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 GPR183P32249 361 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 TAS2R45P59539 299 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 RAB5BP61020 215 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 RELQ04864 619 aaPredicted RBP8.35□□□□□ -1.07
HMGCL-204ENST00000436439 C9orf66Q5T8R8 295 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 PATE2Q6UY27 113 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 Q8WTZ3 238 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 ISOC2Q96AB3 205 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms