RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 LINC00032P0C843 101 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 CD34P28906 385 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 FOXA1P55317 472 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 HBA1P69905 142 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 EIF4EBP1Q13541 118 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-212ENST00000434424 HIST2H3PS2Q5TEC6 136 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 FAM78BQ5VT40 261 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 SFXN4Q6P4A7 337 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 ZCCHC23Q6ZST2 131 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 HMGN2P46Q86SG4 172 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 SLC25A40Q8TBP6 338 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 SEC22CQ9BRL7 303 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 PECRQ9BY49 303 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 OR2J1Q9GZK6 312 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 FKBP14Q9NWM8 211 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 GLTPQ9NZD2 209 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 CALML5Q9NZT1 146 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 MARCOQ9UEW3 520 aaPredicted RBP4.29□□□□□ -1.72
PTPRK-212ENST00000434424 FIS1Q9Y3D6 152 aa4.29□□□□□ -1.72
PTPRK-212ENST00000434424 A0A087WUJ7 227 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 NDUFA2O43678 99 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 SULT1B1O43704 296 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 ALOX5APP20292 161 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 CDK2P24941 298 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 LINC00313P59037 77 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 SPCS3P61009 180 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 PCBD1P61457 104 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 NCALDP61601 193 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 PABPC1L2AQ5JQF8 200 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 PDZD9Q8IXQ8 264 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 CLDN22Q8N7P3 220 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 WFDC9Q8NEX5 89 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 OR51D1Q8NGF3 324 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 RPUSD1Q9UJJ7 312 aaKnown RBP4.28□□□□□ -1.72
PTPRK-212ENST00000434424 PHLDA3Q9Y5J5 127 aa4.28□□□□□ -1.72
PTPRK-212ENST00000434424 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 IGHV3OR16-8A0A075B7F1 116 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 IGKV1-12A0A0C4DH73 117 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 A6NED7 52 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 COLCA2A8K830 154 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 IGKV1D-12P01611 117 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 IGHG2P01859 326 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 ARF6P62330 175 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 TSPAN31Q12999 210 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 OR8B8Q15620 311 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 TMEM69Q5SWH9 247 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 HIST2H3AQ71DI3 136 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 CALHM3Q86XJ0 350 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 LRRC18Q8N456 261 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 SLC25A44Q96H78 314 aaPredicted RBP4.27□□□□□ -1.73
PTPRK-212ENST00000434424 DIRAS2Q96HU8 199 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 CCDC115Q96NT0 180 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 TMEM109Q9BVC6 243 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 RYR3Q15413 4870 aa4.27□□□□□ -1.73
PTPRK-212ENST00000434424 IGKV1OR2-108A0A075B7D4 117 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 H3BUX3 64 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 NPFFO15130 113 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 DENRO43583 198 aaKnown RBP4.26□□□□□ -1.73
PTPRK-212ENST00000434424 CPSF4O95639 269 aaKnown RBP4.26□□□□□ -1.73
PTPRK-212ENST00000434424 PPP1CCP36873 323 aaKnown RBP4.26□□□□□ -1.73
PTPRK-212ENST00000434424 DNAJB13P59910 316 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 PRDX4Q13162 271 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 APOFQ13790 326 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 ZNF181Q2M3W8 571 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 CCDC153Q494R4 210 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 LDLRAD2Q5SZI1 272 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 VMO1Q7Z5L0 202 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 CLECL1Q8IZS7 167 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 C3orf22Q8N5N4 141 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 ZNF709Q8N972 641 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 SLC35B4Q969S0 331 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 WASHC3Q9Y3C0 194 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 NOP16Q9Y3C1 178 aaKnown RBP4.26□□□□□ -1.73
PTPRK-212ENST00000434424 MRPS16Q9Y3D3 137 aaKnown RBP4.26□□□□□ -1.73
PTPRK-212ENST00000434424 PLCE1Q9P212 2302 aa4.26□□□□□ -1.73
PTPRK-212ENST00000434424 TRAV38-1A0A0B4J264 116 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 TCRBV4S1A1TA0A5B7 111 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 LINC00862A6NCI5 91 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 A8MUU9 505 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 H3BMM0 161 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 HMGN4O00479 90 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 CTLA4P16410 223 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 ZNF32P17041 273 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 OR10J1P30954 320 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 PRR14LQ5THK1 2151 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 OR4X2Q8NGF9 303 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 OR5J2Q8NH18 312 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 DGCR14Q96DF8 476 aaKnown RBP4.25□□□□□ -1.73
PTPRK-212ENST00000434424 RMI2Q96E14 147 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 SCRT1Q9BWW7 348 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 ZNF443Q9Y2A4 671 aaPredicted RBP4.25□□□□□ -1.73
PTPRK-212ENST00000434424 DNAJC15Q9Y5T4 150 aa4.25□□□□□ -1.73
PTPRK-212ENST00000434424 TRBV24-1A0A075B6N3 115 aa4.24□□□□□ -1.73
PTPRK-212ENST00000434424 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
PTPRK-212ENST00000434424 DISC1C4P0D8 188 aa4.24□□□□□ -1.73
PTPRK-212ENST00000434424 C5orf58C9J3I9 102 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms