RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 MRPS16Q9Y3D3 137 aaKnown RBP1.66□□□□□ -2.14
CLK1-204ENST00000432425 IER3IP1Q9Y5U9 82 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 COL5A1P20908 1838 aaPredicted RBP1.66□□□□□ -2.14
CLK1-204ENST00000432425 SCN1AP35498 2009 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 GAPVD1Q14C86 1478 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 SVILO95425 2214 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ANK1P16157 1881 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 PTPRBP23467 1997 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 ANKRD12Q6UB98 2062 aa1.66□□□□□ -2.14
CLK1-204ENST00000432425 DOCK2Q92608 1830 aa1.65□□□□□ -2.14
CLK1-204ENST00000432425 CCDC88CQ9P219 2028 aa1.65□□□□□ -2.14
CLK1-204ENST00000432425 TRAV13-1A0A0B4J241 112 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 IGHV1-58A0A0C4DH39 117 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 MUC21A0A0G2JKD1 596 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 MEIS3P1A6NDR6 274 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 H3BMG7 143 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 EDF1O60869 148 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 GABARAPO95166 117 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 TNFP01375 233 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 MT-ATP8P03928 68 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 HLA-DPB1P04440 258 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 SLC25A5P05141 298 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 IFITM1P13164 125 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 LGALS3P17931 250 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 CRYGSP22914 178 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 RPL22P35268 128 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 ETV6P41212 452 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 TMEM258P61165 79 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 SNRPD3P62318 126 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 GNGT1P63211 74 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 DCDP81605 110 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 DEFA5Q01523 94 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 BSPH1Q075Z2 132 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 C9orf153Q5TBE3 101 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 Q6AWC8 147 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 Q6ZUT4 128 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 H2AFVQ71UI9 128 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 PDPNQ86YL7 162 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 ATOH7Q8N100 152 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 C10orf126Q8N4M7 172 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 C3orf56Q8N813 242 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 WFDC5Q8TCV5 224 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 SLC25A46Q96AG3 418 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 TBL1YQ9BQ87 522 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 SNRNP25Q9BV90 132 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 SEC11CQ9BY50 192 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 DUSP21Q9H596 190 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 ASF1BQ9NVP2 202 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 C21orf62Q9NYP8 219 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 CCDC167Q9P0B6 97 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 AK3Q9UIJ7 227 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 MPC1Q9Y5U8 109 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 FANCAO15360 1455 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 ERVK-7P63135 1459 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 ROBO1Q9Y6N7 1651 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 RGPD4Q7Z3J3 1758 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 RBBP6Q7Z6E9 1792 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 MAP2P11137 1827 aaKnown RBP1.65□□□□□ -2.15
CLK1-204ENST00000432425 NUP98P52948 1817 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 SPHKAPQ2M3C7 1700 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 RGS12O14924 1447 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 KIDINS220Q9ULH0 1771 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 GLI3P10071 1580 aa1.65□□□□□ -2.15
CLK1-204ENST00000432425 PLEKHH2Q8IVE3 1493 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 ZNF407Q9C0G0 2248 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 TRAV19A0A0A6YYK7 116 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IGHV3-66A0A0C4DH42 116 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IGKV1-9A0A0C4DH69 117 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IGKV1-6A0A0C4DH72 117 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IRGMA1A4Y4 181 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OOSP1A8MZH6 123 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 GEMIN2O14893 280 aaKnown RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 RER1O15258 196 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 PITX3O75364 302 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 CST7O76096 145 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OR5AC1P0C628 307 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BOP23527 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BBP33778 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 NUDT2P50583 147 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BDP58876 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BCP62807 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 KLRD1Q13241 179 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 ZNF846Q147U1 533 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 PEA15Q15121 130 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST2H2BEQ16778 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 TDRG1Q3Y452 100 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 KHDC3LQ587J8 217 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 AADACL3Q5VUY0 350 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 SVBPQ8N300 66 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 KCNRGQ8N5I3 272 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OR8A1Q8NGG7 326 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OR10AC1Q8NH08 325 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 C2orf15Q8WU43 125 aaKnown RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BHQ93079 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BNQ99877 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BMQ99879 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 DPY30Q9C005 99 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 FGF23Q9GZV9 251 aaPredicted RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 RERGLQ9H628 205 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms