RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LIME1Q9H400 295 aa9.34□□□□□ -0.91
PTCH1-208ENST00000430669 IGHV3-35A0A0C4DH35 117 aa9.34□□□□□ -0.92
PTCH1-208ENST00000430669 COLCA2A8K830 154 aa9.34□□□□□ -0.92
PTCH1-208ENST00000430669 C1QTNF9P0C862 333 aa9.34□□□□□ -0.92
PTCH1-208ENST00000430669 C11orf53Q8IXP5 236 aa9.34□□□□□ -0.92
PTCH1-208ENST00000430669 DKK4Q9UBT3 224 aa9.34□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF207O43670 478 aaKnown RBP9.33□□□□□ -0.92
PTCH1-208ENST00000430669 DUX3Q96PT4 197 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 GPR61Q9BZJ8 451 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 CT83Q5H943 113 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 C1orf194Q5T5A4 169 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 PAX9P55771 341 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 FAM208BQ5VWN6 2430 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 LOXP28300 417 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-208ENST00000430669 TCF23Q7RTU1 214 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-208ENST00000430669 PSMB2P49721 201 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 SCRT1Q9BWW7 348 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 TNFRSF18Q9Y5U5 241 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 TMEM14CQ9P0S9 112 aa9.33□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 SOD3P08294 240 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 C19orf54Q5BKX5 351 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 SHANK2-AS3Q9BTD1 123 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF138P52744 262 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 FAM110DQ8TAY7 271 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-208ENST00000430669 VPS25Q9BRG1 176 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 THAP8Q8NA92 274 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 YAE1D1Q9NRH1 226 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 ZMAT5Q9UDW3 170 aaKnown RBP9.32□□□□□ -0.92
PTCH1-208ENST00000430669 H3BUX3 64 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 M0R381 172 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF324O75467 553 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-208ENST00000430669 PRB3Q04118 309 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-208ENST00000430669 STHQ8IWL8 128 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 KLF2Q9Y5W3 355 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV1-69P01742 117 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 TCRAP04437 139 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 NUDT10Q8NFP7 164 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 NUDT11Q96G61 164 aa9.32□□□□□ -0.92
PTCH1-208ENST00000430669 ALKBH7Q9BT30 221 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-208ENST00000430669 VWC2Q2TAL6 325 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 LAMTOR2Q9Y2Q5 125 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-208ENST00000430669 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
PTCH1-208ENST00000430669 FBXL19-AS1Q494R0 122 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 C10orf55Q5SWW7 151 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF114Q8NC26 417 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 PCNTO95613 3336 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV2-70P01814 119 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 SRSF1Q07955 248 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTCH1-208ENST00000430669 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 FAM181BA6NEQ2 426 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 CR1LQ2VPA4 569 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 H3BUA1 57 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 LINC00614P0C842 121 aa9.31□□□□□ -0.92
PTCH1-208ENST00000430669 PEF1Q9UBV8 284 aaKnown RBP9.31□□□□□ -0.92
PTCH1-208ENST00000430669 IL15RAQ13261 267 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 FAM74A4Q5TZK3 123 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
PTCH1-208ENST00000430669 TMEM219Q86XT9 240 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 OR11H6Q8NGC7 330 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
PTCH1-208ENST00000430669 LYPD6BQ8NI32 183 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 DNLZQ5SXM8 178 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV2-5P01817 119 aa9.3□□□□□ -0.92
PTCH1-208ENST00000430669 CD7P09564 240 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 ITLN2Q8WWU7 325 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-208ENST00000430669 HIST1H4GQ99525 98 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV3-11P01762 117 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 ARHGAP32A7KAX9 2087 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 FABP2P12104 132 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 MST1LQ2TV78 715 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 C5orf24Q7Z6I8 188 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 SERF1AO75920 110 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 SPATA31B1PQ5VZV4 182 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV3OR16-13A0A075B7E8 117 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 IGHV3-74A0A0B4J1X5 117 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 IGKV1-39P01597 117 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 HBDP02042 147 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 IGKV1D-39P04432 117 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 LCN12Q6JVE5 192 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 WIPF3A6NGB9 483 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 ZNF134P52741 427 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 GUSBP1Q15486 140 aa9.29□□□□□ -0.92
PTCH1-208ENST00000430669 MRPL27Q9P0M9 148 aaKnown RBP9.29□□□□□ -0.92
PTCH1-208ENST00000430669 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms