RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 DAZAP1Q96EP5 407 aaKnown RBP6.96□□□□□ -1.29
GABPB1-205ENST00000429662 PRSS22Q9GZN4 317 aa6.96□□□□□ -1.29
GABPB1-205ENST00000429662 TMEM133Q9H2Q1 129 aa6.96□□□□□ -1.29
GABPB1-205ENST00000429662 RPP21Q9H633 154 aaKnown RBP6.96□□□□□ -1.29
GABPB1-205ENST00000429662 C7orf69Q9H7B7 122 aa6.96□□□□□ -1.29
GABPB1-205ENST00000429662 C1RLQ9NZP8 487 aa6.96□□□□□ -1.29
GABPB1-205ENST00000429662 TET2Q6N021 2002 aaPredicted RBP6.96□□□□□ -1.3
GABPB1-205ENST00000429662 A0A0G2JNJ9 132 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 IGLC7A0M8Q6 106 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 E7EUB6 86 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 DLEU1O43261 78 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 SLC25A17O43808 307 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 FRMD6-AS1P0C7T7 363 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 C3orf79P0CE67 100 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 COX6B1P14854 86 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 ZNF25P17030 456 aaPredicted RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 BTF3P20290 206 aaKnown RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 LOXP28300 417 aaPredicted RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 ADORA2A-AS1P86434 159 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 BSPH1Q075Z2 132 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 KIAA1644Q3SXP7 199 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 MORN5Q5VZ52 161 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 NHLRC2Q8NBF2 726 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 OR1B1Q8NGR6 318 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 CCL17Q92583 94 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 RNASE6Q93091 150 aaKnown RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 DYNLRB1Q9NP97 96 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 OTORQ9NRC9 128 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 DCAF16Q9NXF7 216 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 PPP1R14DQ9NXH3 145 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 Q9UFV3 132 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 MRPS16Q9Y3D3 137 aaKnown RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 SVEP1Q4LDE5 3571 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 A0A1B0GW15 77 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 HIGD1CA8MV81 97 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 B9A039 149 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 M0R2Z0 102 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 LTAP01374 205 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 P01737 135 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 OR5AL1P0C617 328 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 IGLC2P0DOY2 106 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 ORM2P19652 201 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 REG1BP48304 166 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 SLC35B1P78383 322 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 SSBP2P81877 361 aaPredicted RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 SLAQ13239 276 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 LYPD1Q8N2G4 141 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 OR8B3Q8NGG8 313 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 RCHY1Q96PM5 261 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 OR8B2Q96RD0 313 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 TXN2Q99757 166 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 SMR3AQ99954 134 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 ZNRD1Q9P1U0 126 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 GOLT1BQ9Y3E0 138 aa6.95□□□□□ -1.3
GABPB1-205ENST00000429662 F11RQ9Y624 299 aaKnown RBP6.95□□□□□ -1.3
GABPB1-205ENST00000429662 TRAV9-2A0A087WT02 112 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 IGHV1-69-2A0A0G2JMI3 117 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 NPIPB6E9PJ23 425 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 K7EQM0 130 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 MOSP00540 346 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 TCRAP04437 139 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 THBDP07204 575 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 GP9P14770 177 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 APOBEC3AP31941 199 aaPredicted RBP6.94□□□□□ -1.3
GABPB1-205ENST00000429662 RBPJQ06330 500 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 TNXAQ16473 311 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 MRGPRG-AS1Q2M3A8 158 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 LYPD2Q6UXB3 125 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 RBPMS2Q6ZRY4 209 aaKnown RBP6.94□□□□□ -1.3
GABPB1-205ENST00000429662 C22orf34Q6ZV56 151 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 FAM168AQ92567 244 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 NRGNQ92686 78 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 LINC00479Q96M42 142 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 NDFIP1Q9BT67 221 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 SSBP3Q9BWW4 388 aaPredicted RBP6.94□□□□□ -1.3
GABPB1-205ENST00000429662 CLEC7AQ9BXN2 247 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 Q9H3A6 140 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 ZNF835Q9Y2P0 537 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 SIGLEC9Q9Y336 463 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 INSIG2Q9Y5U4 225 aa6.94□□□□□ -1.3
GABPB1-205ENST00000429662 TANC2Q9HCD6 1990 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 INTS1Q8N201 2190 aaKnown RBP6.93□□□□□ -1.3
GABPB1-205ENST00000429662 DSCAML1Q8TD84 2053 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 IGHV2-26A0A0B4J1V2 119 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 ADARB2-AS1A8MUL3 147 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-205ENST00000429662 NTF3P20783 257 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 FOXA3P55318 350 aaPredicted RBP6.93□□□□□ -1.3
GABPB1-205ENST00000429662 C10orf55Q5SWW7 151 aa6.93□□□□□ -1.3
GABPB1-205ENST00000429662 Q6AWC8 147 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms