RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 THAP8Q8NA92 274 aa13.09□□□□□ -0.31
RHBDF1-204ENST00000428730 Q6ZT83 130 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 OR4X2Q8NGF9 303 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 FAM222BQ8WU58 562 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 CCL13Q99616 98 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 LGALS9BQ3B8N2 356 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 LGALS9CQ6DKI2 356 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 DPF1Q92782 380 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 ZNF414Q96IQ9 312 aa13.08□□□□□ -0.32
RHBDF1-204ENST00000428730 IGKV2D-26A0A0A0MRZ7 120 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 IGHV1-18A0A0C4DH31 117 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 BMI1P35226 326 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 MTURNQ8N3F0 131 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 RIGQ13278 110 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 WFDC2Q14508 124 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 ZCCHC24Q8N2G6 241 aaKnown RBP13.07□□□□□ -0.32
RHBDF1-204ENST00000428730 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
RHBDF1-204ENST00000428730 SMKR1H3BMG3 65 aa13.06□□□□□ -0.32
RHBDF1-204ENST00000428730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
RHBDF1-204ENST00000428730 SMIM13P0DJ93 91 aa13.06□□□□□ -0.32
RHBDF1-204ENST00000428730 MBNL2Q5VZF2 373 aaKnown RBP13.06□□□□□ -0.32
RHBDF1-204ENST00000428730 RPUSD1Q9UJJ7 312 aaKnown RBP13.06□□□□□ -0.32
RHBDF1-204ENST00000428730 A0A1W2PPI3 338 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 GAGE12HA6NDE8 117 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 SH2D6Q7Z4S9 175 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 KLRC4-KLRK1H3BQV0 150 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 CCDC144NLQ6NUI1 221 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 ZNF576Q9H609 170 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 INTS1Q8N201 2190 aaKnown RBP13.05□□□□□ -0.32
RHBDF1-204ENST00000428730 M0R296 226 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 PMS2CLQ68D20 193 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 MDS2Q8NDY4 140 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 MAFAQ8NHW3 353 aaPredicted RBP13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 OSR1Q8TAX0 266 aaPredicted RBP13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 RITA1Q96K30 269 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 C17orf77Q96MU5 243 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 SIVA1O15304 175 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 CRIP1P50238 77 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 ATP1A1-AS1Q5TC04 95 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 PRELID3AQ96N28 172 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 ATP6V0BQ99437 205 aa13.04□□□□□ -0.32
RHBDF1-204ENST00000428730 LHBP01229 141 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 GAFA1Q96PS6 74 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 VGLL1Q99990 258 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 SLC25A17O43808 307 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 FTH1P19P0C7X4 201 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 LYZP61626 148 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 ARPC1AQ92747 370 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 A0A1B0GV72 72 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 TMEM189A5PLL7 270 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 CCL3L1P16619 93 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 RAB9AP51151 201 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 CD300EQ496F6 205 aaPredicted RBP13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 ZNF833PQ6ZTB9 187 aa13.03□□□□□ -0.32
RHBDF1-204ENST00000428730 NDUFS8O00217 210 aa13.02□□□□□ -0.32
RHBDF1-204ENST00000428730 NDUFS7O75251 213 aa13.02□□□□□ -0.32
RHBDF1-204ENST00000428730 HBDP02042 147 aa13.02□□□□□ -0.32
RHBDF1-204ENST00000428730 KIR2DL2P43627 348 aaPredicted RBP13.02□□□□□ -0.32
RHBDF1-204ENST00000428730 SUB1P53999 127 aaKnown RBP eCLIP13.02□□□□□ -0.32
RHBDF1-204ENST00000428730 PLCE1Q9P212 2302 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 TNFRSF1AP19438 455 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 INSL3P51460 131 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 MZT1Q08AG7 82 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 ETDBQ3ZM63 59 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 OTORQ9NRC9 128 aa13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 RAI1Q7Z5J4 1906 aaPredicted RBP13.02□□□□□ -0.33
RHBDF1-204ENST00000428730 KALRNO60229 2985 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 C16orf97H3BN30 126 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 SCGB1A1P11684 91 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 CEACAM3P40198 252 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 CHAC1Q9BUX1 264 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 WI2-2373I1.2A0A1W2PRP0 233 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 C9orf106Q8NAJ2 232 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 C8orf49Q96NF6 230 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
RHBDF1-204ENST00000428730 IGHV3-72A0A0B4J1Y9 119 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 H3BMG7 143 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 NPYP01303 97 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 IGLV1-44P01699 117 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 IGLV2-23P01705 113 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 ATP5G2Q06055 141 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 PAX8Q06710 450 aa13□□□□□ -0.33
RHBDF1-204ENST00000428730 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms