RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 C11orf52Q96A22 123 aa6.65□□□□□ -1.35
CD44-208ENST00000428726 DUX5Q96PT3 197 aa6.65□□□□□ -1.35
CD44-208ENST00000428726 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.35
CD44-208ENST00000428726 VAMP8Q9BV40 100 aa6.65□□□□□ -1.35
CD44-208ENST00000428726 RAB1BQ9H0U4 201 aa6.65□□□□□ -1.35
CD44-208ENST00000428726 TBL2Q9Y4P3 447 aaKnown RBP6.65□□□□□ -1.35
CD44-208ENST00000428726 HTR1DP28221 377 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 FXYD7P58549 80 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 FOXL1Q12952 345 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 PERPQ96FX8 193 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 NOL4LQ96MY1 436 aaPredicted RBP6.64□□□□□ -1.35
CD44-208ENST00000428726 PMCHL2Q9BQD1 86 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 AMMECR1Q9Y4X0 333 aaPredicted RBP6.64□□□□□ -1.35
CD44-208ENST00000428726 TCF21O43680 179 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 IL4P05112 153 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 HINT1P49773 126 aaPredicted RBP6.64□□□□□ -1.35
CD44-208ENST00000428726 PRRX1P54821 245 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 OR2D3Q8NGH3 330 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 RNASEH2CQ8TDP1 164 aaKnown RBP6.64□□□□□ -1.35
CD44-208ENST00000428726 TNFRSF14Q92956 283 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 ZC2HC1AQ96GY0 325 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 FAM167A-AS1Q96KT0 104 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 RBM14Q96PK6 669 aaKnown RBP6.64□□□□□ -1.35
CD44-208ENST00000428726 RNF2Q99496 336 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 TMEM208Q9BTX3 173 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 LY96Q9Y6Y9 160 aa6.64□□□□□ -1.35
CD44-208ENST00000428726 C9JCJ5 164 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 DIRC3C9JPN6 131 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 IGLV1-47P01700 117 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 CSN3P07498 182 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 LGALS7P47929 136 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 Q56UQ5 140 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 WFDC12Q8WWY7 111 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 TXN2Q99757 166 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 FLNAP21333 2647 aaKnown RBP6.63□□□□□ -1.35
CD44-208ENST00000428726 LOC102724200A0A096LPH7 203 aaPredicted RBP6.63□□□□□ -1.35
CD44-208ENST00000428726 LIPFP07098 398 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 COA6Q5JTJ3 125 aaKnown RBP6.63□□□□□ -1.35
CD44-208ENST00000428726 IBA57Q5T440 356 aaKnown RBP6.63□□□□□ -1.35
CD44-208ENST00000428726 NEU1Q99519 415 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 MRPL32Q9BYC8 188 aaKnown RBP6.63□□□□□ -1.35
CD44-208ENST00000428726 NACAE9PAV3 2078 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 FSTL3O95633 263 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 TPPP2P59282 170 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 CX3CL1P78423 397 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 RPEL1Q2QD12 228 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 FBXL19-AS1Q494R0 122 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 C1orf194Q5T5A4 169 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 TPTE2P1Q5T6R2 138 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 TIMD4Q96H15 378 aa6.63□□□□□ -1.35
CD44-208ENST00000428726 ITPR3Q14573 2671 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 SNAI2O43623 268 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 NBEAP1P0C6P0 100 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 FOSL1P15407 271 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 PPIFP30405 207 aaKnown RBP6.62□□□□□ -1.35
CD44-208ENST00000428726 UCNP55089 124 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 OXLD1Q5BKU9 147 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 Q8TAT8 98 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 PGLYRP4Q96LB8 373 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 RASL11BQ9BPW5 248 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 CLEC5AQ9NY25 188 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 FN1P02751 2386 aaKnown RBP6.62□□□□□ -1.35
CD44-208ENST00000428726 APCP25054 2843 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 IGHV3-11P01762 117 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 SLAQ13239 276 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 SPATA45Q537H7 98 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 DNLZQ5SXM8 178 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 RNASEKQ6P5S7 137 aaKnown RBP6.62□□□□□ -1.35
CD44-208ENST00000428726 Q6ZN92 141 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 TMEM75Q8N9X5 138 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 TEX45Q8NA69 505 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 TMEM68Q96MH6 324 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 NRN1Q9NPD7 142 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 IL36BQ9NZH7 164 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 DPM3Q9P2X0 92 aa6.62□□□□□ -1.35
CD44-208ENST00000428726 TRAV9-1A0A075B6T8 112 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 A0A1W2PRE2 83 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 TCRBV4S1A1TA0A5B7 111 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 TEX22C9J3V5 150 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 SRD5A1P18405 259 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 PDLIM4P50479 330 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 UBE2G1P62253 170 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 OR1L4Q8NGR5 311 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 GNG7O60262 68 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 GPR183P32249 361 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 COMPP49747 757 aaPredicted RBP6.61□□□□□ -1.35
CD44-208ENST00000428726 SELENOTP62341 195 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 RNF24Q9Y225 148 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 GOLT1BQ9Y3E0 138 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 V9GYV3 84 aa6.61□□□□□ -1.35
CD44-208ENST00000428726 PSMB11A5LHX3 300 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 VWC2LB2RUY7 222 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 HYPMO75409 117 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 NDUFB8O95169 186 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 ETFRF1Q6IPR1 90 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 Q6ZQT7 251 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 THAP8Q8NA92 274 aa6.6□□□□□ -1.35
CD44-208ENST00000428726 FXYD5Q96DB9 178 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms