RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 CD81P60033 236 aa11.38□□□□□ -0.59
VARS2-203ENST00000428017 EIF5AP63241 154 aaKnown RBP11.38□□□□□ -0.59
VARS2-203ENST00000428017 CD300CQ08708 224 aa11.38□□□□□ -0.59
VARS2-203ENST00000428017 ACOT6Q3I5F7 207 aaPredicted RBP11.38□□□□□ -0.59
VARS2-203ENST00000428017 TMUB2Q71RG4 321 aa11.38□□□□□ -0.59
VARS2-203ENST00000428017 PSMG3Q9BT73 122 aaPredicted RBP11.38□□□□□ -0.59
VARS2-203ENST00000428017 ZNF471Q9BX82 626 aaPredicted RBP11.38□□□□□ -0.59
VARS2-203ENST00000428017 SLC25A32Q9H2D1 315 aa11.38□□□□□ -0.59
VARS2-203ENST00000428017 MS4A6AQ9H2W1 248 aa11.38□□□□□ -0.59
VARS2-203ENST00000428017 PKD1L1Q8TDX9 2849 aa11.38□□□□□ -0.59
VARS2-203ENST00000428017 ATF4P18848 351 aaPredicted RBP11.37□□□□□ -0.59
VARS2-203ENST00000428017 GCSAMLQ5JQS6 135 aa11.37□□□□□ -0.59
VARS2-203ENST00000428017 FAM78BQ5VT40 261 aa11.37□□□□□ -0.59
VARS2-203ENST00000428017 NRN1Q9NPD7 142 aa11.37□□□□□ -0.59
VARS2-203ENST00000428017 AURKAIP1Q9NWT8 199 aaPredicted RBP11.37□□□□□ -0.59
VARS2-203ENST00000428017 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 MBP02144 154 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
VARS2-203ENST00000428017 RHOBP62745 196 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 SERF2P84101 59 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 DEFA6Q01524 100 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 BPIFA4PQ86YQ2 179 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 MRPL32Q9BYC8 188 aaKnown RBP11.36□□□□□ -0.59
VARS2-203ENST00000428017 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
VARS2-203ENST00000428017 A0A1W2PPV4 95 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 M6PRP20645 277 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 MEOX2P50222 304 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 LGALSLQ3ZCW2 172 aaPredicted RBP11.35□□□□□ -0.59
VARS2-203ENST00000428017 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 OR2G3Q8NGZ4 309 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 SH3BGRL3Q9H299 93 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
VARS2-203ENST00000428017 CD7P09564 240 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 ID1P41134 155 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
VARS2-203ENST00000428017 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 LRRC20Q8TCA0 184 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 SEPSECSQ9HD40 501 aaKnown RBP11.34□□□□□ -0.59
VARS2-203ENST00000428017 RFNGQ9Y644 331 aa11.34□□□□□ -0.59
VARS2-203ENST00000428017 TRAV5A0A0B4J249 113 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 OR11H12B2RN74 326 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
VARS2-203ENST00000428017 TAS2R45P59539 299 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 RAB2AP61019 212 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 AKR1C8PQ5T2L2 129 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 MORN5Q5VZ52 161 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 UBQLN2Q9UHD9 624 aa11.33□□□□□ -0.6
VARS2-203ENST00000428017 K7EQG2 157 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 FAM122CQ6P4D5 195 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 BAP18Q8IXM2 172 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 C9orf62Q8N4C0 152 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 MRAPQ8TCY5 172 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 DCANP1Q8TF63 244 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 C16orf92Q96LL3 132 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 TUBA4BQ9H853 241 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 SMAD5-AS1Q9Y6J3 95 aa11.32□□□□□ -0.6
VARS2-203ENST00000428017 K7EIL1 84 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 OR7C2O60412 319 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 GUK1Q16774 197 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 KHDC3LQ587J8 217 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 EIF5AL1Q6IS14 154 aaKnown RBP11.31□□□□□ -0.6
VARS2-203ENST00000428017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 Q8N1Y9 231 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 FAM110AQ9BQ89 295 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 SLC25A2Q9BXI2 301 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 TMEM14CQ9P0S9 112 aa11.31□□□□□ -0.6
VARS2-203ENST00000428017 A0A087X0K7 114 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 ISLRO14498 428 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 ZNF688P0C7X2 276 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 SPP1P10451 314 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
VARS2-203ENST00000428017 PSMB3P49720 205 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 NKX2-5P52952 324 aaPredicted RBP11.3□□□□□ -0.6
VARS2-203ENST00000428017 DEFB131AP59861 70 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 ODF3L2Q3SX64 289 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 LCN15Q6UWW0 184 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 LINC00052Q96N35 136 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 PAXXQ9BUH6 204 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
VARS2-203ENST00000428017 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
VARS2-203ENST00000428017 NOTCH1P46531 2555 aa11.29□□□□□ -0.6
VARS2-203ENST00000428017 MRPS12O15235 138 aaKnown RBP11.29□□□□□ -0.6
VARS2-203ENST00000428017 FAM24BQ8N5W8 94 aa11.29□□□□□ -0.6
VARS2-203ENST00000428017 HRH4Q9H3N8 390 aa11.29□□□□□ -0.6
VARS2-203ENST00000428017 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
VARS2-203ENST00000428017 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
VARS2-203ENST00000428017 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
VARS2-203ENST00000428017 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms