RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 UBE2WQ96B02 151 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 PFN2P35080 140 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 LINC01551Q86U37 167 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 AGMATQ9BSE5 352 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 SOCS3O14543 225 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 RS1O15537 224 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 THBDP07204 575 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 TRBV24-1A0A075B6N3 115 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 CFHR3Q02985 330 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 TRAV3A0A0B4J244 114 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 CD5LO43866 347 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 OVOL2Q9BRP0 275 aa10.3□□□□□ -0.76
HDLBP-214ENST00000427183 PRB2P02812 416 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-214ENST00000427183 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 SS18Q15532 418 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 C5orf47Q569G3 176 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 C5orf24Q7Z6I8 188 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 PRDM6Q9NQX0 595 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 MPZP25189 248 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-214ENST00000427183 LINC00477Q96M19 166 aa10.29□□□□□ -0.76
HDLBP-214ENST00000427183 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 CD5P06127 495 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 LINC00271P0C7V0 271 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 GAGE1Q13065 139 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 PMVKQ15126 192 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 PRSS57Q6UWY2 283 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 TSSC4Q9Y5U2 329 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-214ENST00000427183 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-214ENST00000427183 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 CHD5Q8TDI0 1954 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 EREGO14944 169 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 BRD3OSQ6XYD6 125 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 GLRX5Q86SX6 157 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 ZNF329Q86UD4 541 aa10.28□□□□□ -0.76
HDLBP-214ENST00000427183 HEATR1Q9H583 2144 aaKnown RBP10.28□□□□□ -0.76
HDLBP-214ENST00000427183 SRSF8Q9BRL6 282 aaKnown RBP10.28□□□□□ -0.76
HDLBP-214ENST00000427183 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.76
HDLBP-214ENST00000427183 LILRA1O75019 489 aa10.27□□□□□ -0.76
HDLBP-214ENST00000427183 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.76
HDLBP-214ENST00000427183 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.76
HDLBP-214ENST00000427183 IGHV1-18A0A0C4DH31 117 aa10.27□□□□□ -0.77
HDLBP-214ENST00000427183 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
HDLBP-214ENST00000427183 LINC01549A6NIU2 74 aa10.27□□□□□ -0.77
HDLBP-214ENST00000427183 NXPH4O95158 308 aa10.27□□□□□ -0.77
HDLBP-214ENST00000427183 IFI6P09912 130 aa10.27□□□□□ -0.77
HDLBP-214ENST00000427183 PAQR4Q8N4S7 273 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-214ENST00000427183 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
HDLBP-214ENST00000427183 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 NDUFS5O43920 106 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 RASL11AQ6T310 242 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 FAM186AA6NE01 2351 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 IGHV1-46P01743 117 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 TRACP01848 142 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 RPP25LQ8N5L8 163 aaKnown RBP10.26□□□□□ -0.77
HDLBP-214ENST00000427183 MSRB2Q9Y3D2 182 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 TET1Q8NFU7 2136 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 LINC00205P59089 165 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 LINC01559Q495D7 138 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 RNASE6Q93091 150 aaKnown RBP10.26□□□□□ -0.77
HDLBP-214ENST00000427183 LIME1Q9H400 295 aa10.26□□□□□ -0.77
HDLBP-214ENST00000427183 A0A1B0GUS0 222 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 LINC00479Q96M42 142 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 DKK1O94907 266 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 TMEM200BQ69YZ2 307 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 DOCK10Q96BY6 2186 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 hADV29S1A0JD25 119 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 A0A1B0GWJ7 208 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 CYTL1Q9NRR1 136 aa10.25□□□□□ -0.77
HDLBP-214ENST00000427183 DOCK9Q9BZ29 2069 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 CEP290O15078 2479 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 DTX1Q86Y01 620 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 IGHV1-3A0A0C4DH29 117 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 IGKV1-12A0A0C4DH73 117 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 GAGE12JA6NER3 117 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 MMP23AO75900 390 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 IGKV1D-12P01611 117 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 IGHG3P01860 377 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 GAGE4Q13068 117 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 GAGE5Q13069 117 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 LY6DQ14210 128 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 MLANAQ16655 118 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 CEACAM8P31997 349 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-214ENST00000427183 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 UBL5Q9BZL1 73 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 COL4A4P53420 1690 aaPredicted RBP10.24□□□□□ -0.77
HDLBP-214ENST00000427183 A0A1W2PR77 199 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 SLC25A16P16260 332 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 FOXF2Q12947 444 aa10.24□□□□□ -0.77
HDLBP-214ENST00000427183 H3BUX3 64 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms